The Strongyloides bioassay toolbox: A unique opportunity to accelerate functional biology for nematode parasites

IF 1.4 4区 医学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Luke C. Cadd, Bethany Crooks, Nikki J. Marks, Aaron G. Maule, Angela Mousley, Louise E. Atkinson
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引用次数: 3

Abstract

Caenorhabditis elegans is a uniquely powerful tool to aid understanding of fundamental nematode biology. While C. elegans boasts an unrivalled array of functional genomics tools and phenotype bioassays the inherent differences between free-living and parasitic nematodes underscores the need to develop these approaches in tractable parasite models. Advances in functional genomics approaches, including RNA interference and CRISPR/Cas9 gene editing, in the parasitic nematodes Strongyloides ratti and Strongyloides stercoralis provide a unique and timely opportunity to probe basic parasite biology and reveal novel anthelmintic targets in species that are both experimentally and therapeutically relevant pathogens. While Strongyloides functional genomics tools have progressed rapidly, the complementary range of bioassays required to elucidate phenotypic outcomes post-functional genomics remain more limited in scope. To adequately support the exploitation of functional genomic pipelines for studies of gene function in Strongyloides a comprehensive set of species- and parasite-specific quantitative bioassays are required to assess nematode behaviours post-genetic manipulation. Here we review the scope of the current Strongyloides bioassay toolbox, how established Strongyloides bioassays have advanced knowledge of parasite biology, opportunities for Strongyloides bioassay development and, the need for investment in tractable model parasite platforms such as Strongyloides to drive the discovery of novel targets for parasite control.

圆线虫生物测定工具箱:加速线虫寄生虫功能生物学的独特机会
秀丽隐杆线虫是一个独特的强大的工具,以帮助了解基本的线虫生物学。虽然秀丽隐杆线虫拥有无与伦比的功能基因组学工具和表型生物分析,但自由生活线虫和寄生线虫之间的内在差异强调了在可处理的寄生虫模型中开发这些方法的必要性。包括RNA干扰和CRISPR/Cas9基因编辑在内的功能基因组学方法在寄生线虫ratti和stercoralis中的进展,为探索寄生虫基本生物学和揭示实验和治疗相关病原体物种中的新的驱虫靶点提供了独特而及时的机会。虽然类圆线虫功能基因组学工具发展迅速,但功能基因组学后阐明表型结果所需的生物测定的补充范围仍然有限。为了充分支持利用功能基因组管道研究圆线虫的基因功能,需要一套全面的物种和寄生虫特异性定量生物测定来评估遗传操作后线虫的行为。在这里,我们回顾了目前Strongyloides生物测定工具箱的范围,建立的Strongyloides生物测定方法如何提高寄生虫生物学的知识,发展Strongyloides生物测定的机会,以及投资于易于处理的模型寄生虫平台(如Strongyloides)以推动发现寄生虫控制的新靶点的必要性。
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来源期刊
CiteScore
2.90
自引率
0.00%
发文量
51
审稿时长
63 days
期刊介绍: The journal provides a medium for rapid publication of investigations of the molecular biology and biochemistry of parasitic protozoa and helminths and their interactions with both the definitive and intermediate host. The main subject areas covered are: • the structure, biosynthesis, degradation, properties and function of DNA, RNA, proteins, lipids, carbohydrates and small molecular-weight substances • intermediary metabolism and bioenergetics • drug target characterization and the mode of action of antiparasitic drugs • molecular and biochemical aspects of membrane structure and function • host-parasite relationships that focus on the parasite, particularly as related to specific parasite molecules. • analysis of genes and genome structure, function and expression • analysis of variation in parasite populations relevant to genetic exchange, pathogenesis, drug and vaccine target characterization, and drug resistance. • parasite protein trafficking, organelle biogenesis, and cellular structure especially with reference to the roles of specific molecules • parasite programmed cell death, development, and cell division at the molecular level.
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