SARS-CoV-2 Lambda Variant: Spatiotemporal Distribution and Potential Public Health Impact

Cao Chen, Qiang Shi, Xiao-Ping Dong
{"title":"SARS-CoV-2 Lambda Variant: Spatiotemporal Distribution and Potential Public Health Impact","authors":"Cao Chen, Qiang Shi, Xiao-Ping Dong","doi":"10.15212/zoonoses-2021-0009","DOIUrl":null,"url":null,"abstract":"Various SARS-CoV-2 variants have continually emerged since the summer of 2020. Recently, the spread and potential effects of the Lambda variant on public health have caused great scientific and public concern. The Lambda variant (C.37), first identified in Peru in December 2020, contains a novel deletion (Δ246–252) and two novel mutations, L452Q and F490S, not present in the ancestral strain and other variants. The Lambda variant was designated a variant of interest in April of 2021. By the end of July, this variant sequence was detected in more than 30 countries worldwide, mostly in South America. This study analyzed the global spatiotemporal distribution of the Lambda variant from the beginning of January to the end of July from publicly available data. The Lambda variant spread rapidly in Peru and became predominant in March. Circulation of the Lambda variant has also been observed in some neighboring countries, i.e., Argentina, Chile and Ecuador, where it has remained at remarkably low levels. The circulation of the Lambda variant in other countries in South America (e.g., Brazil and Colombia) and other regions of the world has also occurred at very low levels, even though this variant has been known for a long time. Multivariate linear regression analyses of the proportion of case fatalities attributable to the Lambda variant, the new deaths and the new confirmed cases per million (7-day rolling average) in Peru did not show significant associations. A review of the most recent data on the Lambda variant has suggested this variant’s relatively high infectivity in cultured cells and low neutralizing titers of convalescent sera and vaccine-elicited antibodies in vitro. However, the exact effects of this variant on clinical severity and vaccine effectiveness remain poorly documented. The currently authorized COVID-19 vaccines are still believed to provide efficient protection against the Lambda variant.","PeriodicalId":79199,"journal":{"name":"Zoonoses research","volume":"26 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2021-08-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"5","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Zoonoses research","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.15212/zoonoses-2021-0009","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 5

Abstract

Various SARS-CoV-2 variants have continually emerged since the summer of 2020. Recently, the spread and potential effects of the Lambda variant on public health have caused great scientific and public concern. The Lambda variant (C.37), first identified in Peru in December 2020, contains a novel deletion (Δ246–252) and two novel mutations, L452Q and F490S, not present in the ancestral strain and other variants. The Lambda variant was designated a variant of interest in April of 2021. By the end of July, this variant sequence was detected in more than 30 countries worldwide, mostly in South America. This study analyzed the global spatiotemporal distribution of the Lambda variant from the beginning of January to the end of July from publicly available data. The Lambda variant spread rapidly in Peru and became predominant in March. Circulation of the Lambda variant has also been observed in some neighboring countries, i.e., Argentina, Chile and Ecuador, where it has remained at remarkably low levels. The circulation of the Lambda variant in other countries in South America (e.g., Brazil and Colombia) and other regions of the world has also occurred at very low levels, even though this variant has been known for a long time. Multivariate linear regression analyses of the proportion of case fatalities attributable to the Lambda variant, the new deaths and the new confirmed cases per million (7-day rolling average) in Peru did not show significant associations. A review of the most recent data on the Lambda variant has suggested this variant’s relatively high infectivity in cultured cells and low neutralizing titers of convalescent sera and vaccine-elicited antibodies in vitro. However, the exact effects of this variant on clinical severity and vaccine effectiveness remain poorly documented. The currently authorized COVID-19 vaccines are still believed to provide efficient protection against the Lambda variant.
SARS-CoV-2 Lambda变异:时空分布和潜在的公共卫生影响
自2020年夏天以来,各种SARS-CoV-2变种不断出现。最近,Lambda变异对公众健康的传播和潜在影响引起了科学界和公众的极大关注。Lambda变异(C.37)于2020年12月在秘鲁首次发现,包含一个新的缺失(Δ246-252)和两个新的突变,L452Q和F490S,这些突变在祖先菌株和其他变异中不存在。Lambda改型于2021年4月被指定为感兴趣的改型。截至7月底,该变异序列在全球30多个国家(主要在南美洲)被检测到。本研究利用公开数据分析了1月初至7月底全球Lambda变异的时空分布。拉姆达病毒变种在秘鲁迅速传播,并于3月占主导地位。在一些邻国,即阿根廷、智利和厄瓜多尔,也观察到拉姆达变异病毒的传播,这些国家的传播水平仍然非常低。Lambda变异在南美洲其他国家(例如巴西和哥伦比亚)和世界其他地区的传播水平也很低,尽管这种变异已经知道很长时间了。秘鲁因Lambda变异导致的死亡病例比例、新死亡病例和每百万新确诊病例(7天滚动平均值)的多变量线性回归分析未显示出显著关联。对Lambda变异的最新数据的回顾表明,该变异在培养细胞中具有相对较高的传染性,在康复期血清和疫苗诱导的体外抗体中具有较低的中和滴度。然而,这种变异对临床严重程度和疫苗有效性的确切影响仍然缺乏文献记载。目前批准的COVID-19疫苗仍然被认为可以有效地预防Lambda变体。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信
小红书