Genetic variations and interspesific relationships in Salvia (Lamiaceae) using SCoT molecular markers

IF 2.1 4区 生物学 Q2 Agricultural and Biological Sciences
Caryologia Pub Date : 2021-12-21 DOI:10.36253/caryologia-886
Songpo Liu, Yuxuan Wang, Yuwei Song, M. Khayatnezhad, A. Minaeifar
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Abstract

The genus Salvia includes an enormous assemblage of nearly 1000 species dispersed around the World. Iran having 19 endemic species out of 61 is regarded as one of the important regions for Salvia diversity in Southwest Asia. Salvia species are herbaceous, rarely biennial or annual, often strongly aromatic. These species are of medicinal, commercial and horticultural value. Due to the importance of these plant species, we performed a combination of morphological and molecular data for this species. For this study, we used 145 randomly collected plants from 30 species in 18 provinces. Amplification of genomic DNA using 10 primers produced 134 bands, of which 129 were polymorphic (97.78%). The obtained high average PIC and MI values revealed high capacity of SCoT primers to detect polymorphic loci among Salvia species. The genetic similarities of 30 collections were estimated from 0.61 to 0.93. According to the SCoT markers analysis, S. tebesana and S. verticillata had the lowest similarity and the species of S. eremophila and S. santolinifolia had the highest similarity. The aims of present study are: 1) can SCoT markers identify Salvia species, 2) what is the genetic structure of these taxa in Iran, and 3) to investigate the species inter-relationship? The present study revealed that SCoT markers can identify the species.
利用SCoT分子标记分析鼠尾草属植物的遗传变异及种间亲缘关系
鼠尾草属包括分布在世界各地的近1000种的巨大组合。在61种鼠尾草中,伊朗有19种特有种,被认为是西南亚重要的鼠尾草多样性地区之一。鼠尾草种是草本,很少二年生或一年生,通常强烈芳香。这些物种具有药用、商业和园艺价值。由于这些植物物种的重要性,我们对该物种进行了形态学和分子数据的结合。在本研究中,我们随机采集了来自18个省30个物种的145株植物。10条引物扩增出134条条带,其中多态性129条(97.78%)。获得的高平均PIC和MI值表明SCoT引物具有较高的检测鼠尾草种间多态性位点的能力。30份材料的遗传相似度在0.61 ~ 0.93之间。SCoT标记分析结果表明,柽柳与黄斑柽柳的相似性最低,沙蚕与桑托利叶的相似性最高。本研究的目的是:1)SCoT标记能否识别鼠尾草种类,2)伊朗鼠尾草分类群的遗传结构是什么,3)研究鼠尾草种类间的相互关系。本研究表明,SCoT标记可以识别物种。
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来源期刊
Caryologia
Caryologia 生物-遗传学
CiteScore
1.60
自引率
23.80%
发文量
26
审稿时长
12 months
期刊介绍: Caryologia is devoted to the publication of original papers, and occasionally of reviews, about plant, animal and human karyological, cytological, cytogenetic, embryological and ultrastructural studies. Articles about the structure, the organization and the biological events relating to DNA and chromatin organization in eukaryotic cells are considered. Caryologia has a strong tradition in plant and animal cytosystematics and in cytotoxicology. Bioinformatics articles may be considered, but only if they have an emphasis on the relationship between the nucleus and cytoplasm and/or the structural organization of the eukaryotic cell.
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