Reactions’ Descriptors Selection and Yield Estimation Using Metaheuristic Algorithms and Voting Ensemble

IF 1.7 4区 计算机科学 Q3 COMPUTER SCIENCE, INFORMATION SYSTEMS
Olutomilayo Olayemi Petinrin, Faisal Saeed, Xiangtao Li, F. Ghabban, Ka-chun Wong
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引用次数: 1

Abstract

: Bioactive compounds in plants, which can be synthesized using N-arylation methods such as the Buchwald-Hartwig reaction, are essential in drug discovery for their pharmacological effects. Important descriptors are necessary for the estimation of yields in these reactions. This study explores ten metaheuristic algorithms for descriptor selection and model a voting ensemble for evaluation. The algorithms were evaluated based on computational time and the number of selected descriptors. Analyses show that robust performance is obtained with more descriptors, compared to cases where fewer descriptors are selected. The essential descriptor was deduced based on the frequency of occurrence within the 50 extracted data subsets, and better performance was achieved with the voting ensemble than other algorithms with RMSE of 6.4270 and R 2 of 0.9423. The results and deductions from this study can be readily applied in the decision-making process of chemical synthesis by saving the computational cost associated with initial descriptor selection for yield estimation. The ensemble model has also shown robust performance in its yield estimation ability and efficiency.
基于元启发式算法和投票集合的反应描述符选择和产出估计
植物中的生物活性化合物,可以通过n -芳基化方法合成,如Buchwald-Hartwig反应,在药物发现中对其药理作用至关重要。重要的描述符对于估计这些反应的产率是必要的。本研究探索了十种用于描述符选择的元启发式算法,并建立了一个用于评估的投票集合模型。基于计算时间和所选描述符的数量对算法进行了评估。分析表明,与选择较少描述符的情况相比,使用更多描述符可以获得健壮的性能。根据所提取的50个数据子集的出现频率推导出基本描述符,投票集合的RMSE为6.4270,r2为0.9423,优于其他算法。本研究的结果和推论可以很容易地应用于化学合成的决策过程,节省了初始描述符选择与产率估计相关的计算成本。该集成模型在产量估计能力和效率方面也表现出了较好的鲁棒性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Cmc-computers Materials & Continua
Cmc-computers Materials & Continua 工程技术-材料科学:综合
CiteScore
5.30
自引率
19.40%
发文量
345
审稿时长
1 months
期刊介绍: This journal publishes original research papers in the areas of computer networks, artificial intelligence, big data management, software engineering, multimedia, cyber security, internet of things, materials genome, integrated materials science, data analysis, modeling, and engineering of designing and manufacturing of modern functional and multifunctional materials. Novel high performance computing methods, big data analysis, and artificial intelligence that advance material technologies are especially welcome.
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