Morphometric analysis and genetic diversity in Glaucium (Papaveraceae) using sequence related amplified polymorphism

IF 2.1 4区 生物学 Q2 Agricultural and Biological Sciences
T. Shu, Chao Li, C. She, Huan Zhao
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Abstract

Glaucium belongs to the Papaveraceae family. Glaucium is a genus of annual, biennial, and perennial herbaceous plants that thrive on salty soils and near the sea.Glaucium is represented by a total of 10 taxa in Iran. Sequence-related amplified polymorphism was used to estimate genetic diversity. A combination of morphological and genomic data was used to identify genetic diversity and species features in Glaucium species. In eight provinces, 65 people connected to five Glaucium were gathered. Through polymerase chain reaction (PCR) amplification of five Glaucium species, a total of 144 (Number of total loci) (NTL) DNA bands were obtained. These bands were created by combining 10 different selective primers. The total number of amplified fragments varied from seven to twenty-six. The expected unbiased heterozygozity (H) ranged from 0.19 (G. grandiflorum subsp. grandiflorum var. grandiflorum) to 0.33 (G. grandiflorum subsp. grandiflorum var. grandiflorum) (G. oxylobum var. oxylobum). The genetic similarities between five species range from 0.63 to 0.88. The findings of clustering revealed two large groupings. The SRAP (Sequence-related amplified polymorphism) markers study revealed that G. grandiflorum and G. oxylobum var. oxylobum had the least similarity. This investigation also discovered a substantial indication of distance isolation (Mantel test results). The current findings indicate that sequence-related amplified polymorphism can discover and understand genetic affinity in Glaucium species. The current findings have consequences for biodiversity and conservation efforts. Aside from that, the current findings may pave the way for identifying acceptable ecotypes for grazing and pasture uses in Iran.
利用序列相关扩增多态性分析木瓜科植物Glaucium的形态计量学及遗传多样性
Glaucium属罂粟科。Glaucium是一种一年生、二年生和多年生草本植物,生长在咸水土壤和海边。Glaucium在伊朗共有10个分类群。利用序列相关扩增多态性估计遗传多样性。采用形态学和基因组学相结合的方法,鉴定了青藓属植物的遗传多样性和物种特征。在8个省,与5个Glaucium有关的65人被聚集在一起。通过聚合酶链反应(PCR)对5种Glaucium进行扩增,共获得144条(total loci) (NTL) DNA条带。这些条带是由10种不同的选择性引物组合而成的。扩增片段的总数从7到26不等。期望的无偏杂合度(H)范围为0.19 (G. grandflorum subsp.)。grandflorum变种grandflorum)至0.33 (G. grandflorum subsp.;大桔梗(G. oxylobum var. oxylobum)5个物种之间的遗传相似性在0.63 ~ 0.88之间。聚类的发现揭示了两大群体。SRAP (Sequence-related amplified polymorphism,序列相关扩增多态性)标记研究表明,桔梗与紫菀的相似性最小。这项调查还发现了距离隔离的重要迹象(Mantel测试结果)。目前的研究结果表明,序列相关的扩增多态性可以发现和理解Glaucium物种的遗传亲和力。目前的发现对生物多样性和保护工作有影响。除此之外,目前的发现可能为在伊朗确定可接受的放牧和牧场生态类型铺平道路。
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来源期刊
Caryologia
Caryologia 生物-遗传学
CiteScore
1.60
自引率
23.80%
发文量
26
审稿时长
12 months
期刊介绍: Caryologia is devoted to the publication of original papers, and occasionally of reviews, about plant, animal and human karyological, cytological, cytogenetic, embryological and ultrastructural studies. Articles about the structure, the organization and the biological events relating to DNA and chromatin organization in eukaryotic cells are considered. Caryologia has a strong tradition in plant and animal cytosystematics and in cytotoxicology. Bioinformatics articles may be considered, but only if they have an emphasis on the relationship between the nucleus and cytoplasm and/or the structural organization of the eukaryotic cell.
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