Molecular Docking Studies of Dihydropyridazin-3(2H)-one Derivatives as Anticonvulsant Agents

S. Prasad, S. L. Khokra, M. Devgun
{"title":"Molecular Docking Studies of Dihydropyridazin-3(2H)-one\nDerivatives as Anticonvulsant Agents","authors":"S. Prasad, S. L. Khokra, M. Devgun","doi":"10.14233/ajomc.2021.ajomc-p349","DOIUrl":null,"url":null,"abstract":"Molecular docking is the identification of ligand’s correct binding geometry i.e. pose in the binding\nsite and estimation of its binding affinity for rational design of drug molecule. The current study\nendeavored the high throughput in silico screening of 56 derivatives of dihydropyridazin-3(2H)-one\ndocked with human cytosolic branched chain amino transferase using PyRx-virtual screening tool. Out\nof 56 compounds, almost all the test compounds showed very good binding affinity score. Gabapentin\nwas used as standard drug which shows binding affinity of -6.2. On the basis of H-bond interactions,\ncompounds 3, 9, 11, 25, 26, 31, 34, 39, 47, 48, 51, 54, 56 were found to be potent outcome for\nanticonvulsant activity. Compounds 11, 25, 39, 56 showed excellent H-bond interactions with protein\nactive site, Among which compound 11 showed the outstanding interactions with acceptable bond\nlength 2.34, 2.57, 2.62, 3.03 Å.","PeriodicalId":8846,"journal":{"name":"Asian Journal of Organic & Medicinal Chemistry","volume":"1 6 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2021-12-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Asian Journal of Organic & Medicinal Chemistry","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.14233/ajomc.2021.ajomc-p349","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

Abstract

Molecular docking is the identification of ligand’s correct binding geometry i.e. pose in the binding site and estimation of its binding affinity for rational design of drug molecule. The current study endeavored the high throughput in silico screening of 56 derivatives of dihydropyridazin-3(2H)-one docked with human cytosolic branched chain amino transferase using PyRx-virtual screening tool. Out of 56 compounds, almost all the test compounds showed very good binding affinity score. Gabapentin was used as standard drug which shows binding affinity of -6.2. On the basis of H-bond interactions, compounds 3, 9, 11, 25, 26, 31, 34, 39, 47, 48, 51, 54, 56 were found to be potent outcome for anticonvulsant activity. Compounds 11, 25, 39, 56 showed excellent H-bond interactions with protein active site, Among which compound 11 showed the outstanding interactions with acceptable bond length 2.34, 2.57, 2.62, 3.03 Å.
抗惊厥药二氢吡嗪-3(2H)- 1衍生物的分子对接研究
分子对接是识别配体在结合位点上的正确结合几何构型,并估计其结合亲和力,从而合理设计药物分子。本研究利用pyrx虚拟筛选工具,对56个与人胞浆支链氨基转移酶对接的二氢吡啶-3(2H)- 1衍生物进行了高通量的硅筛选。56个化合物中,几乎所有的化合物都表现出很好的结合亲和力。以加巴喷丁为标准药,结合亲和力为-6.2。根据氢键相互作用,化合物3、9、11、25、26、31、34、39、47、48、51、54、56被发现是抗惊厥活性的有效结果。化合物11、25、39、56与蛋白失活位点表现出良好的氢键相互作用,其中化合物11与可接受键长2.34、2.57、2.62、3.03 Å表现出良好的相互作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信