A Brief Overview of SARS-CoV-2

I. Ali, Javed Iqbal Dasti, S. Khan, A. Jabbar
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Abstract

In December 2019, a novel coronavirus was identified in the city of Wuhan, since then more than 6,267,488 laboratory confirmed cases have been reported as of June 1st, 2020 and on March 11th WHO declared it a global pandemic. The highest numbers of fatalities are so far reported from USA (n=106,195), followed by UK (n=38,489), Italy (n=33,415) and Brazil (n=29,341). Scanning electron microscopy revealed spherical virus with a diameter of 120 nm-160nm. Its genome consists of a positive sense single stranded RNA (ssRNA+) of 26-32 kilo base pairs in length. Recent genome sequencing elucidated remarkable genetic similarity with bat-SLCoVZXC21, bat-SL-CoVZC45 virus strains and the sequenced strains showed 99.9% genetic homology with each other. The S2 protein of this novel virus has 93% similarity with bat-SL-CoVZXC21, bat-SL-CoVZC45 strains. The RNA was detected in the blood and stool samples. The most frequent manifestation of the infection is cough, fever, anosmia, pneumonia characterized by bilateral infiltrates and dyspnea on chest imaging. The Reverse Transcriptase Real Time Polymerase Chain Reaction (RTPCR) can be used effectively for the detection of viral RNA. National Health Commission of China suggested combination of anti-HIV drug lopinavir and ritonavir and a dose of nebulized interferon α for the treatment. A novel nucleotide analogue remdesivir is also being used for the treatment in United States. Enforcing timely preventive measures such as wearing masks, avoiding close contact with infected individuals, respiratory hygiene, avoiding contact with live or dead animals, regular hand washing at (least for 20s) and use of hand sanitizers can significantly reduce risk of transmission.
SARS-CoV-2概述
2019年12月,武汉市发现了一种新型冠状病毒,自那时起,截至2020年6月1日,已报告了超过6267488例实验室确诊病例,并于3月11日世卫组织宣布其为全球大流行。迄今为止报告的死亡人数最多的是美国(n= 106195),其次是英国(n= 38489)、意大利(n= 33415)和巴西(n= 29341)。扫描电镜显示球形病毒,直径为120nm -160nm。其基因组由长度为26-32千碱基对的正义单链RNA (ssRNA+)组成。最近的基因组测序结果表明,与蝙蝠- slcovzxc21、蝙蝠- sl - covzc45病毒株具有显著的遗传相似性,序列株之间的遗传同源性为99.9%。该病毒的S2蛋白与蝙蝠- sl - covzxc21、蝙蝠- sl - covzc45株的相似度为93%。在血液和粪便样本中检测到RNA。最常见的感染表现为咳嗽、发烧、嗅觉丧失、以双侧浸润为特征的肺炎和胸部影像学上的呼吸困难。逆转录酶实时聚合酶链反应(RTPCR)是检测病毒RNA的有效方法。中国国家卫生健康委员会建议联合使用抗hiv药物洛匹那韦和利托那韦以及一剂雾剂干扰素α。在美国,一种新的核苷酸类似物remdesivir也被用于治疗。及时采取预防措施,如戴口罩,避免与感染者密切接触,呼吸卫生,避免接触活的或死的动物,定期洗手(至少20分钟)和使用洗手液,可大大降低传播风险。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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