Flexibility vs. robustness in cell cycle regulation of timing of M-phase entry in Xenopus laevis embryo cell-free extract.

M. Dȩbowski, Mohammed El Dika, J. Malejczyk, R. Zdanowski, C. Prigent, J. Tassan, M. Kloc, M. Lachowicz, J. Kubiak
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引用次数: 2

Abstract

During the cell cycle, cyclin dependent kinase 1 (CDK1) and protein phosphatase 2A (PP2A) play major roles in the regulation of mitosis. CDK1 phosphorylates a series of substrates triggering M-phase entry. Most of these substrates are dephosphorylated by PP2A. To allow phosphorylation of CDK1 substrates, PP2A is progressively inactivated upon M-phase entry. We have shown previously that the interplay between these two activities determines the timing of M-phase entry. Slight diminution of CDK1 activity by the RO3306 inhibitor delays M-phase entry in a dose-dependent manner in Xenopus embryo cell-free extract, while reduction of PP2A activity by OA inhibitor accelerates this process also in a dose-dependent manner. However, when a mixture of RO3306 and OA is added to the extract, an intermediate timing of M-phase entry is observed. Here we use a mathematical model to describe and understand this interplay. Simulations showing acceleration and delay in M-phase entry match previously described experimental data. CDC25 phosphatase is a major activator of CDK1 and acts through CDK1 Tyr15 and Thr14 dephosphorylation. Addition of CDC25 activity to our mathematical model was also consistent with our experimental results. To verify whether our assumption that the dynamics of CDC25 activation used in this model are the same in all experimental variants, we analyzed the dynamics of CDC25 phosphorylation, which reflect its activation. We confirm that these dynamics are indeed very similar in control extracts and when RO3306 and OA are present separately. However, when RO3306 and OA are added simultaneously to the extract, activation of CDC25 is slightly delayed. Integration of this parameter allowed us to improve our model. Furthermore, the pattern of CDK1 dephosphorylation on Tyr15 showed that the real dynamics of CDK1 activation are very similar in all experimental variants. The model presented here accurately describes, in mathematical terms, how the interplay between CDK1, PP2A and CDC25 controls the flexible timing of M-phase entry.
非洲爪蟾胚胎无细胞提取物m期进入时间对细胞周期调控的灵活性与稳健性。
在细胞周期中,细胞周期蛋白依赖性激酶1 (cyclin dependent kinase 1, CDK1)和蛋白磷酸酶2A (protein phosphatase 2A, PP2A)在有丝分裂的调控中起主要作用。CDK1磷酸化一系列底物,触发m期进入。大多数这些底物被PP2A去磷酸化。为了使CDK1底物磷酸化,PP2A在进入m期时逐渐失活。我们以前已经表明,这两个活动之间的相互作用决定了m相进入的时间。在爪蟾胚无细胞提取物中,RO3306抑制剂对CDK1活性的轻微降低以剂量依赖的方式延迟了m期进入,而OA抑制剂对PP2A活性的降低也以剂量依赖的方式加速了这一过程。然而,当在萃取物中加入RO3306和OA的混合物时,观察到m相进入的中间时间。在这里,我们使用数学模型来描述和理解这种相互作用。模拟显示m相进入的加速和延迟符合先前描述的实验数据。CDC25磷酸酶是CDK1的主要激活因子,通过CDK1 Tyr15和Thr14去磷酸化起作用。在我们的数学模型中加入CDC25活性也与我们的实验结果一致。为了验证我们在该模型中使用的CDC25激活动力学在所有实验变体中是否相同的假设,我们分析了反映其激活的CDC25磷酸化动力学。我们证实,在对照提取物和RO3306和OA分别存在时,这些动力学确实非常相似。然而,当提取物中同时加入RO3306和OA时,CDC25的激活稍微延迟。这个参数的集成使我们能够改进我们的模型。此外,Tyr15上CDK1去磷酸化的模式表明,CDK1激活的真实动态在所有实验变体中都非常相似。本文提出的模型用数学术语准确描述了CDK1、PP2A和CDC25之间的相互作用如何控制m相进入的灵活时间。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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