ZIKA--How fast does this virus mutate?

Ian S Logan
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Abstract

The World Health Organization has declared the present Zika virus epidemic to be a 'Public Health Emergency of International Concern'. The virus appears to have spread from Thailand to French Polynesia in 2013, and has since infected over a million people in the countries of South and Central America. In most cases the infection is mild and transient, but the virus does appear to be strongly neurotropic and the presumptive cause of both birth defects in fetuses and Guillain-Barré syndrome in some adults. In this paper, the techniques and utilities developed in the study of mitochondrial DNA were applied to the Zika virus. As a result, it is possible to show in a simple manner how a phylogenetic tree may be constructed and how the mutation rate of the virus can be measured. The study showed the mutation rate to vary between 12 and 25 bases a year, in a viral genome of 10272 bases. This rapid mutation rate will enable the geographic spread of the epidemic to be monitored easily and may also prove useful in assisting the identification of preventative measures that are working, and those that are not.

兹卡——这种病毒变异的速度有多快?
世界卫生组织宣布目前的寨卡病毒疫情为“国际关注的突发公共卫生事件”。该病毒似乎于2013年从泰国传播到法属波利尼西亚,此后在南美洲和中美洲国家感染了100多万人。在大多数情况下,感染是轻微和短暂的,但该病毒似乎具有强烈的嗜神经性,是胎儿出生缺陷和一些成年人格林-巴利综合征的假定原因。本文将线粒体DNA研究的技术和实用性应用于寨卡病毒。因此,可以以简单的方式展示如何构建系统发育树以及如何测量病毒的突变率。研究表明,在10272个碱基的病毒基因组中,突变率每年在12到25个碱基之间变化。这种快速的突变率将使疫情的地理传播能够很容易地得到监测,也可能被证明有助于识别有效和无效的预防措施。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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