The First Nucleic Acid Strands May Have Grown on Peptides via Primeval Reverse Translation

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Arturo Tozzi, Marco Mazzeo
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Abstract

The central dogma of molecular biology dictates that, with only a few exceptions, information proceeds from DNA to protein through an RNA intermediate. Examining the enigmatic steps from prebiotic to biological chemistry, we take another road suggesting that primordial peptides acted as template for the self-assembly of the first nucleic acids polymers. Arguing in favour of a sort of archaic “reverse translation” from proteins to RNA, our basic premise is a Hadean Earth where key biomolecules such as amino acids, polypeptides, purines, pyrimidines, nucleosides and nucleotides were available under different prebiotically plausible conditions, including meteorites delivery, shallow ponds and hydrothermal vents scenarios. Supporting a protein-first scenario alternative to the RNA world hypothesis, we propose the primeval occurrence of short two-dimensional peptides termed “selective amino acid- and nucleotide-matching oligopeptides” (henceforward SANMAOs) that noncovalently bind at the same time the polymerized amino acids and the single nucleotides dispersed in the prebiotic milieu. In this theoretical paper, we describe the chemical features of this hypothetical oligopeptide, its biological plausibility and its virtues from an evolutionary perspective. We provide a theoretical example of SANMAO’s selective pairing between amino acids and nucleosides, simulating a poly-Glycine peptide that acts as a template to build a purinic chain corresponding to the glycine’s extant triplet codon GGG. Further, we discuss how SANMAO might have endorsed the formation of low-fidelity RNA’s polymerized strains, well before the appearance of the accurate genetic material’s transmission ensured by the current translation apparatus.

Abstract Image

第一个核酸链可能是通过原始反向翻译在肽上生长的。
分子生物学的中心法则规定,除了少数例外,信息通过RNA中间体从DNA传递到蛋白质。通过研究从益生元到生物化学的神秘步骤,我们走上了另一条路,表明原始肽是第一批核酸聚合物自组装的模板。我们支持从蛋白质到RNA的一种古老的“反向翻译”,我们的基本前提是在哈迪亚地球上,氨基酸、多肽、嘌呤、嘧啶、核苷和核苷酸等关键生物分子在不同的益生元合理条件下可用,包括陨石输送、浅池和热液喷口场景。支持RNA世界假说的蛋白质优先方案,我们提出了被称为“选择性氨基酸和核苷酸匹配寡肽”(此后为SANMAOs)的短二维肽的原始出现,这些肽同时与聚合的氨基酸和分散在益生元环境中的单个核苷酸非共价结合。在这篇理论论文中,我们从进化的角度描述了这种假设的寡肽的化学特征、其生物学合理性及其优点。我们提供了SANMAO在氨基酸和核苷之间选择性配对的理论例子,模拟了作为模板构建嘌呤链的多甘氨酸肽,该嘌呤链对应于甘氨酸现存的三重密码子GGG。此外,我们还讨论了SANMAO是如何支持低保真度RNA聚合菌株的形成的,早在当前翻译设备确保的准确遗传物质传播出现之前。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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