Impurity Dimethylcarbamoyl-OBt Detected in an API Induced by the Degradation of HBTU in DMF

IF 3.5 3区 化学 Q2 CHEMISTRY, APPLIED
Yi Yang*, Lena Hansen, Jörgen Kjellgren Sjögren, Ileana Rodríguez León, Jean-Marie Receveur, Fabrizio Badalassi*
{"title":"Impurity Dimethylcarbamoyl-OBt Detected in an API Induced by the Degradation of HBTU in DMF","authors":"Yi Yang*,&nbsp;Lena Hansen,&nbsp;Jörgen Kjellgren Sjögren,&nbsp;Ileana Rodríguez León,&nbsp;Jean-Marie Receveur,&nbsp;Fabrizio Badalassi*","doi":"10.1021/acs.oprd.1c00168","DOIUrl":null,"url":null,"abstract":"<p >A non-peptide-related impurity with an abundance of 0.09% was detected in a batch of Ferring Pharmaceuticals’ peptide active pharmaceutical ingredient (API) Peptide Q. A dedicated simulative reaction and comparison with the references revealed that the impurity was induced by the degradation of the uronium coupling reagent HBTU in the dimethylformamide (DMF) solution at the HBTU-directed peptide amidation cyclization step. The structure of the subject non-peptide-related impurity has been confirmed as 1-[((dimethylamino)carbonyl]oxy)-1<i>H</i>-benzotriazole or its isomer 1-(dimethylcarbamoyl)-1<i>H</i>-1,2,3-benzotriazol-3-ium-3-olate (both are abbreviated as dimethylcarbamoyl-OBt in this paper). The formation of dimethylcarbamoyl-OBt could also be realized in <i>N</i>-methyl-2-pyrrolidone (NMP) or acetonitrile (ACN) as the organic solvent. This finding is relevant to a myriad of syntheses of peptides and small molecules involved in uronium coupling reagent-mediated amidation/esterification reactions, such as cyclization, side-chain modification, and segment condensation. In such cases, particularly those that proceed with the subject HBTU-mediated reaction in DMF, NMP, or ACN as the very last step of the whole synthetic process, scrutiny of the API for dimethylcarbamoyl-OBt as an impurity should be considered.</p>","PeriodicalId":55,"journal":{"name":"Organic Process Research & Development","volume":"25 8","pages":"1923–1931"},"PeriodicalIF":3.5000,"publicationDate":"2021-07-27","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1021/acs.oprd.1c00168","citationCount":"3","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Organic Process Research & Development","FirstCategoryId":"92","ListUrlMain":"https://pubs.acs.org/doi/10.1021/acs.oprd.1c00168","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, APPLIED","Score":null,"Total":0}
引用次数: 3

Abstract

A non-peptide-related impurity with an abundance of 0.09% was detected in a batch of Ferring Pharmaceuticals’ peptide active pharmaceutical ingredient (API) Peptide Q. A dedicated simulative reaction and comparison with the references revealed that the impurity was induced by the degradation of the uronium coupling reagent HBTU in the dimethylformamide (DMF) solution at the HBTU-directed peptide amidation cyclization step. The structure of the subject non-peptide-related impurity has been confirmed as 1-[((dimethylamino)carbonyl]oxy)-1H-benzotriazole or its isomer 1-(dimethylcarbamoyl)-1H-1,2,3-benzotriazol-3-ium-3-olate (both are abbreviated as dimethylcarbamoyl-OBt in this paper). The formation of dimethylcarbamoyl-OBt could also be realized in N-methyl-2-pyrrolidone (NMP) or acetonitrile (ACN) as the organic solvent. This finding is relevant to a myriad of syntheses of peptides and small molecules involved in uronium coupling reagent-mediated amidation/esterification reactions, such as cyclization, side-chain modification, and segment condensation. In such cases, particularly those that proceed with the subject HBTU-mediated reaction in DMF, NMP, or ACN as the very last step of the whole synthetic process, scrutiny of the API for dimethylcarbamoyl-OBt as an impurity should be considered.

Abstract Image

DMF中HBTU降解诱导API中杂质二甲基氨基甲酰- obt的检测
在一批Ferring Pharmaceuticals的肽活性药物成分(API) peptide q中检测到一种丰度为0.09%的非肽相关杂质。通过专门的模拟反应和与参考文献的比较,发现该杂质是在HBTU导向的肽酰胺环化步骤中,由脲偶联试剂HBTU在二甲基甲酰胺(DMF)溶液中降解所致。本课题非肽相关杂质的结构已被证实为1-[(二甲氨基)羰基]氧)- 1h -苯并三唑或其异构体1-(二甲基氨甲酰)- 1h -1,2,3-苯并三唑-3-ium-3-酸酯(本文均简称为二甲基氨甲酰obt)。以n -甲基-2-吡咯烷酮(NMP)或乙腈(ACN)为有机溶剂也可生成二甲基氨基甲酰- obt。这一发现与无数涉及脲偶联试剂介导的酰胺化/酯化反应的肽和小分子的合成有关,如环化,侧链修饰和段缩合。在这种情况下,特别是在DMF、NMP或ACN中进行hbtu介导的反应作为整个合成过程的最后一步的情况下,应考虑对二甲氨基甲酰- obt作为杂质的API进行审查。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
CiteScore
6.90
自引率
14.70%
发文量
251
审稿时长
2 months
期刊介绍: The journal Organic Process Research & Development serves as a communication tool between industrial chemists and chemists working in universities and research institutes. As such, it reports original work from the broad field of industrial process chemistry but also presents academic results that are relevant, or potentially relevant, to industrial applications. Process chemistry is the science that enables the safe, environmentally benign and ultimately economical manufacturing of organic compounds that are required in larger amounts to help address the needs of society. Consequently, the Journal encompasses every aspect of organic chemistry, including all aspects of catalysis, synthetic methodology development and synthetic strategy exploration, but also includes aspects from analytical and solid-state chemistry and chemical engineering, such as work-up tools,process safety, or flow-chemistry. The goal of development and optimization of chemical reactions and processes is their transfer to a larger scale; original work describing such studies and the actual implementation on scale is highly relevant to the journal. However, studies on new developments from either industry, research institutes or academia that have not yet been demonstrated on scale, but where an industrial utility can be expected and where the study has addressed important prerequisites for a scale-up and has given confidence into the reliability and practicality of the chemistry, also serve the mission of OPR&D as a communication tool between the different contributors to the field.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信