Mean-field theory of the interaction of the magnesium ion with biopolymers: the case of lysozyme

IF 1.8 4区 生物学 Q3 BIOPHYSICS
Theo Odijk
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引用次数: 0

Abstract

A statistical theory is presented of the magnesium ion interacting with lysozyme under conditions where the latter is positively charged. Temporarily assuming magnesium is not noncovalently bound to the protein, I solve the nonlinear Poisson–Boltzmann equation accurately and uniformly in a perturbative fashion. The resulting expression for the effective charge, which is larger than nominal owing to overshooting, is subtle and cannot be asymptotically expanded at high ionic strengths that are practical. An adhesive potential taken from earlier work together with the assumption of possibly bound magnesium is then fitted to be in accord with measurements of the second virial coefficient by Tessier et al. The resulting numbers of bound magnesium ions as a function of MgBr\(_2\) concentration are entirely reasonable compared with densitometry measurements.

镁离子与生物聚合物相互作用的平均场理论:溶菌酶的例子
在溶菌酶带正电的条件下,提出了镁离子与溶菌酶相互作用的统计理论。暂时假设镁不是与蛋白质非共价结合的,我以一种微扰的方式精确而均匀地求解非线性泊松-玻尔兹曼方程。所得到的有效电荷的表达式,由于过冲而大于标称,是微妙的,不能在实际的高离子强度下渐近展开。从早期工作中获得的粘附势以及可能结合的镁的假设然后被拟合为与Tessier等人对第二维里系数的测量一致。所得的结合镁离子数作为MgBr \(_2\)浓度的函数与密度测量相比是完全合理的。
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来源期刊
Journal of Biological Physics
Journal of Biological Physics 生物-生物物理
CiteScore
3.00
自引率
5.60%
发文量
20
审稿时长
>12 weeks
期刊介绍: Many physicists are turning their attention to domains that were not traditionally part of physics and are applying the sophisticated tools of theoretical, computational and experimental physics to investigate biological processes, systems and materials. The Journal of Biological Physics provides a medium where this growing community of scientists can publish its results and discuss its aims and methods. It welcomes papers which use the tools of physics in an innovative way to study biological problems, as well as research aimed at providing a better understanding of the physical principles underlying biological processes.
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