Contemporary population genetics data for 23 Y-STR loci in the general Bosnian-Herzegovinian population

Naida Babić Jordamović, Tamara Kojović, S. Dogan, L. Bešić, Lana Salihefendić, R. Konjhodžić, Sabahudin Ćordić, V. Škaro, Petar Projić, Vesna Hadžiavdić, Adna Ašić, D. Marjanovic
{"title":"Contemporary population genetics data for 23 Y-STR loci in the general Bosnian-Herzegovinian population","authors":"Naida Babić Jordamović, Tamara Kojović, S. Dogan, L. Bešić, Lana Salihefendić, R. Konjhodžić, Sabahudin Ćordić, V. Škaro, Petar Projić, Vesna Hadžiavdić, Adna Ašić, D. Marjanovic","doi":"10.31383/ga.vol5iss1pp51-63","DOIUrl":null,"url":null,"abstract":"Bosnia and Herzegovina is located in the South-Eastern Europe, characterized by numerous historical influences, massive migration processes and complex population structure. For that reason, the aim of this study is to provide an accurate and precise update of the population genetics data of allele frequencies on 23 Y-STR loci in Bosnia and Herzegovina using larger sample size. For this purpose, 480 adult male individuals from the general population have been genotyped over 23 Y-STR loci contained in the PowerPlex Y23 system. Population genetics parameters have been calculated, namely allele and haplotype frequencies, gene and haplotype diversity, as well as Rst and P values for the assessment of interpopulation differences. The obtained results are in close agreement with previously published data for Bosnian-Herzegovinian population, as well as for local subpopulations. This study offers significantly increased resolution and information content, with 454 unique haplotypes. Population comparison reveals no statistically significant differences between the study population and 12 European populations used for comparison, as visualized through an MDS plot and neighbour-joining phylogenetic tree. This study offers representative data for local Y chromosomes that can be used for forensic applications, paternity and kinship testing, as well as for genealogical studies.","PeriodicalId":32642,"journal":{"name":"Genetics Applications","volume":" ","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2021-06-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Genetics Applications","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.31383/ga.vol5iss1pp51-63","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

Abstract

Bosnia and Herzegovina is located in the South-Eastern Europe, characterized by numerous historical influences, massive migration processes and complex population structure. For that reason, the aim of this study is to provide an accurate and precise update of the population genetics data of allele frequencies on 23 Y-STR loci in Bosnia and Herzegovina using larger sample size. For this purpose, 480 adult male individuals from the general population have been genotyped over 23 Y-STR loci contained in the PowerPlex Y23 system. Population genetics parameters have been calculated, namely allele and haplotype frequencies, gene and haplotype diversity, as well as Rst and P values for the assessment of interpopulation differences. The obtained results are in close agreement with previously published data for Bosnian-Herzegovinian population, as well as for local subpopulations. This study offers significantly increased resolution and information content, with 454 unique haplotypes. Population comparison reveals no statistically significant differences between the study population and 12 European populations used for comparison, as visualized through an MDS plot and neighbour-joining phylogenetic tree. This study offers representative data for local Y chromosomes that can be used for forensic applications, paternity and kinship testing, as well as for genealogical studies.
波斯尼亚-黑塞哥维那普通人群中23个Y-STR基因座的当代群体遗传学数据
波斯尼亚和黑塞哥维那地处东南欧,历史影响众多,移民过程庞大,人口结构复杂。因此,本研究的目的是使用更大的样本量,对波斯尼亚和黑塞哥维那23个Y-STR基因座的等位基因频率的群体遗传学数据进行准确和精确的更新。为此,来自普通人群的480名成年男性个体已经在PowerPlex Y23系统中包含的23个Y-STR基因座上进行了基因分型。已经计算了群体遗传学参数,即等位基因和单倍型频率、基因和单倍型多样性,以及用于评估群体间差异的Rst和P值。所获得的结果与之前公布的波斯尼亚黑塞哥维那人口以及当地亚群的数据非常一致。这项研究提供了显著提高的分辨率和信息含量,454个独特的单倍型。种群比较显示,研究种群与用于比较的12个欧洲种群之间没有统计学上的显著差异,通过MDS图和相邻系统发育树进行可视化。这项研究提供了局部Y染色体的代表性数据,可用于法医应用、亲子鉴定和亲缘关系测试,以及家谱研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
自引率
0.00%
发文量
4
审稿时长
6 weeks
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信