A new super resolution Faster R-CNN model based detection and classification of urine sediments

IF 5.3 2区 医学 Q1 ENGINEERING, BIOMEDICAL
Derya Avci , Eser Sert , Esin Dogantekin , Ozal Yildirim , Ryszard Tadeusiewicz , Pawel Plawiak
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引用次数: 5

Abstract

The diagnosis of urinary tract infections and kidney diseases using urine microscopy images has gained significant attention of medical community in recent years. These images are usually created by physicians’ own rule of thumb manually. However, this manual urine sediment analysis is usually labor-intensive and time-consuming. In addition, even when physicians carefully examine an image, an erroneous cell recognition may occur due to some optical illusions. In order to achieve cell recognition in low-resolution urine microscopy images with a higher level of accuracy, a new super resolution Faster Region-based Convolutional Neural Network (Faster R-CNN) method is proposed. It aims to increase resolution in low-resolution urine microscopy images using self-similarity based single image super resolution which was used during the pre-processing. De-noising based Wiener filter and Discrete Wavelet Transform (DWT) are used to de-noise high resolution images, respectively, to increase the level of accuracy for image recognition. Finally, for the feature extraction and classification stages, AlexNet, VGFG16 and VGG19 based Faster R-CNN models are used for the recognition and detection of multi-class cells. The model yielded accuracy rates are 98.6%, 96.4% and 96.2% respectively.

一种新的基于超分辨率快速R-CNN模型的尿液沉积物检测和分类
近年来,利用尿液显微图像诊断尿路感染和肾脏疾病受到了医学界的广泛关注。这些图像通常是由医生自己的经验法则手动创建的。然而,这种人工尿液沉积物分析通常是劳动密集型和耗时的。此外,即使当医生仔细检查图像时,由于某些视错觉,错误的细胞识别也可能发生。为了在低分辨率尿液显微图像中实现更高精度的细胞识别,提出了一种新的超分辨率Faster基于区域的卷积神经网络(Faster R-CNN)方法。它的目的是利用预处理过程中使用的基于自相似性的单图像超分辨率来提高低分辨率尿液显微镜图像的分辨率。基于去噪的维纳滤波和离散小波变换分别对高分辨率图像进行去噪,以提高图像识别的精度。最后,在特征提取和分类阶段,使用基于AlexNet、VGFG16和VGG19的Faster R-CNN模型对多类细胞进行识别和检测。模型的准确率分别为98.6%、96.4%和96.2%。
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来源期刊
CiteScore
16.50
自引率
6.20%
发文量
77
审稿时长
38 days
期刊介绍: Biocybernetics and Biomedical Engineering is a quarterly journal, founded in 1981, devoted to publishing the results of original, innovative and creative research investigations in the field of Biocybernetics and biomedical engineering, which bridges mathematical, physical, chemical and engineering methods and technology to analyse physiological processes in living organisms as well as to develop methods, devices and systems used in biology and medicine, mainly in medical diagnosis, monitoring systems and therapy. The Journal''s mission is to advance scientific discovery into new or improved standards of care, and promotion a wide-ranging exchange between science and its application to humans.
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