Janus serumbank – jakten på biomarkører for kreft

Q3 Medicine
Hilde Langseth, Kristina Kymre, Tove Slyngstad, Trine B. Rounge, Randi E. Gislefoss, Marianne Lauritzen
{"title":"Janus serumbank – jakten på biomarkører for kreft","authors":"Hilde Langseth, Kristina Kymre, Tove Slyngstad, Trine B. Rounge, Randi E. Gislefoss, Marianne Lauritzen","doi":"10.5324/nje.v30i1-2.4983","DOIUrl":null,"url":null,"abstract":"Janus is a population-based prospective cancer biobank established in 1973. The biobank consists of residual blood serum samples from more than 300 000 men and women, who participated in different health surveys in Norway or as Red Cross blood donors during the period 1972–2004. It was established on the initiative of Professor of Pathology, Olav Torgersen (1907–78), referring to the longstanding maxim that ‘prevention is better than cure’. The purpose of the biobank was to build up a resource for studies of cancer aetiology and early detection of cancer, by measuring biochemical and immunological changes several years before the patient’s diagnosis. The Janus cohort, with comprehensive registry-based follow-up, enables longitudinal assessment of the preclinical stage in cancer patients or the latent period before the tumour has been established, and is ideal for the search of novel biomarkers of cancer. The Cancer Registry of Norway took over the cohort in 2004. In 2019 the biobank was moved into new semi-automated storage facilities and all samples were barcoded.\nThe biobank is annually linked to the Cancer Registry for updates on new cancer cases and by the end of 2020 the number of incident cancer cases in Janus was 107 366.\nA continuous work in Janus has been on quality assurance of the biospecimens by investigating sample quality parameters like the effect of different pre-processing of the samples as well as storage time and temperature. We have investigated the stability of various hormones, proteins, metabolites, electrolytes and RNAs. This work has contributed to important knowledge in establishing Good Biobank Practice in Norway. In recent years we have also shown that the trace amounts of DNA in Janus is of sufficient quality for genotyping and methylation studies.\nToday Janus is used in a large number of national and international studies and is an active part in several international cancer consortia. The scientific output from the biobank contains a substantial proportion of high impact papers that have contributed to increased knowledge on cancer biomarkers for use in cancer control. Many of the projects have focused on investigating the association between infections and cancer, environmental exposures and cancer and early detection biomarkers. In recent years we have identified RNAs as early detection and potentially screening biomarkers of cancer. We have developed and optimized an RNA sequencing method for samples with low input RNA and produced RNA profiles of pre-clinical samples from 1631 cancer patients and 673 cancer-free controls. The sequencing data is combined with detailed cancer information from the Cancer Registry of Norway and information on environmental exposures from health surveys, in advanced biocomputational analysis. Results published on the healthy control group shows that RNA expression levels are significantly affected by age and smoking. For lung cancer the results showed dynamic changes in differentially expressed circulating RNAs specific to histology and stage. In the future we aim to utilize Janus in omics analyses and produce large scale datasets that can be shared and used in many research projects.","PeriodicalId":35548,"journal":{"name":"Norsk Epidemiologi","volume":null,"pages":null},"PeriodicalIF":0.0000,"publicationDate":"2022-10-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Norsk Epidemiologi","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.5324/nje.v30i1-2.4983","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Medicine","Score":null,"Total":0}
引用次数: 1

Abstract

Janus is a population-based prospective cancer biobank established in 1973. The biobank consists of residual blood serum samples from more than 300 000 men and women, who participated in different health surveys in Norway or as Red Cross blood donors during the period 1972–2004. It was established on the initiative of Professor of Pathology, Olav Torgersen (1907–78), referring to the longstanding maxim that ‘prevention is better than cure’. The purpose of the biobank was to build up a resource for studies of cancer aetiology and early detection of cancer, by measuring biochemical and immunological changes several years before the patient’s diagnosis. The Janus cohort, with comprehensive registry-based follow-up, enables longitudinal assessment of the preclinical stage in cancer patients or the latent period before the tumour has been established, and is ideal for the search of novel biomarkers of cancer. The Cancer Registry of Norway took over the cohort in 2004. In 2019 the biobank was moved into new semi-automated storage facilities and all samples were barcoded. The biobank is annually linked to the Cancer Registry for updates on new cancer cases and by the end of 2020 the number of incident cancer cases in Janus was 107 366. A continuous work in Janus has been on quality assurance of the biospecimens by investigating sample quality parameters like the effect of different pre-processing of the samples as well as storage time and temperature. We have investigated the stability of various hormones, proteins, metabolites, electrolytes and RNAs. This work has contributed to important knowledge in establishing Good Biobank Practice in Norway. In recent years we have also shown that the trace amounts of DNA in Janus is of sufficient quality for genotyping and methylation studies. Today Janus is used in a large number of national and international studies and is an active part in several international cancer consortia. The scientific output from the biobank contains a substantial proportion of high impact papers that have contributed to increased knowledge on cancer biomarkers for use in cancer control. Many of the projects have focused on investigating the association between infections and cancer, environmental exposures and cancer and early detection biomarkers. In recent years we have identified RNAs as early detection and potentially screening biomarkers of cancer. We have developed and optimized an RNA sequencing method for samples with low input RNA and produced RNA profiles of pre-clinical samples from 1631 cancer patients and 673 cancer-free controls. The sequencing data is combined with detailed cancer information from the Cancer Registry of Norway and information on environmental exposures from health surveys, in advanced biocomputational analysis. Results published on the healthy control group shows that RNA expression levels are significantly affected by age and smoking. For lung cancer the results showed dynamic changes in differentially expressed circulating RNAs specific to histology and stage. In the future we aim to utilize Janus in omics analyses and produce large scale datasets that can be shared and used in many research projects.
Janus是一个基于人群的前瞻性癌症生物库,成立于1973年。生物库包括1972-2004年期间参加挪威不同健康调查或作为红十字会献血者的30多万名男性和女性的残留血清样本。它是在病理学教授Olav Torgersen(1907-78)的倡议下建立的,他引用了“预防胜于治疗”的长期格言。生物库的目的是通过测量患者在诊断前几年的生化和免疫学变化,为癌症病因学研究和癌症早期检测建立一个资源。Janus队列,具有全面的基于登记的随访,能够纵向评估癌症患者的临床前阶段或肿瘤建立之前的潜伏期,是寻找新的癌症生物标志物的理想选择。挪威癌症登记处于2004年接管了这一队列。2019年,生物库被转移到新的半自动存储设施中,所有样本都被条形码化。生物库每年都与癌症登记处联系,以获取新癌症病例的最新信息,到2020年底,Janus的癌症病例数量为107366例。在Janus进行的一项持续的工作是通过研究样品的质量参数,如样品的不同预处理效果以及储存时间和温度,来保证生物标本的质量。我们研究了各种激素、蛋白质、代谢物、电解质和rna的稳定性。这项工作为在挪威建立良好生物库实践提供了重要的知识。近年来,我们还表明,微量的DNA在Janus是足够的质量基因分型和甲基化研究。今天,Janus在大量的国家和国际研究中使用,并且是几个国际癌症协会的活跃成员。生物库的科学产出包含了相当大比例的高影响力论文,这些论文有助于增加癌症控制中使用的癌症生物标志物的知识。许多项目都侧重于研究感染与癌症、环境暴露与癌症以及早期检测生物标志物之间的关系。近年来,我们已经确定了rna作为早期检测和潜在筛选癌症的生物标志物。我们开发并优化了一种低输入RNA样本的RNA测序方法,并获得了来自1631名癌症患者和673名无癌症对照的临床前样本的RNA图谱。在先进的生物计算分析中,测序数据与挪威癌症登记处提供的详细癌症信息以及健康调查提供的环境暴露信息相结合。发表在健康对照组的结果显示,RNA表达水平受年龄和吸烟的显著影响。对于肺癌,结果显示了不同组织学和分期的差异表达循环rna的动态变化。在未来,我们的目标是利用Janus组学分析,并产生可以在许多研究项目中共享和使用的大规模数据集。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Norsk Epidemiologi
Norsk Epidemiologi Medicine-Epidemiology
CiteScore
1.10
自引率
0.00%
发文量
25
审稿时长
12 weeks
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信