Genetic characterisation and population structure analysis of Anatolian figs (Ficus carica L.) by SSR markers

IF 2.2 4区农林科学 Q2 HORTICULTURE

Folia Horticulturae Pub Date : 2021-03-26 DOI:10.2478/fhort-2021-0005

A. Ergül, Burcu Pelin Büyük, N. Hazrati, F. Yilmaz, K. Kazan, Nur Arslan, C. Y. Özmen, Semra Aydin, M. Bakır, N. Tan, İ. Kösoğlu, F. Çobanoğlu

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引用次数: 5

Abstract

Abstract The common fig (Ficus carica L.) is a tree species and is one of the oldest fruit trees cultivated in Turkey. The Western Anatolian region of Turkey produces nearly a quarter of the total dried fig production of the world. This region also harbours a rich fig germplasm. However, so far this germplasm has remained largely uncharacterised. In this study, using 14 simple sequence repeat (SSR) primer pairs, we analysed a total of 310 fig accessions from six different regions of Anatolia. In structure analyses, Western Anatolian accessions formed a group, which was correlated with their geographical distribution. In addition, 7 identical, 36 synonymous, and 22 homonymous fig accessions were identified. In multilocus lineages (MLLs) analysis a total of 54 accessions were matched to different accessions as clone assignment. The results will facilitate future germplasm management and breeding efforts in this economically important tree species by identifying genetic diversity, genetic relations and characterising the structure of studied populations and accessions.

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利用SSR标记分析安纳托利亚无花果（Ficus carica L.）的遗传特征及群体结构

摘要无花果（Ficus carica L.）是土耳其栽培的一个树种，也是最古老的果树之一。土耳其安纳托利亚西部地区的无花果干产量占世界总产量的近四分之一。该地区还蕴藏着丰富的无花果种质资源。然而，到目前为止，这种种质在很大程度上还没有表现出来。在本研究中，我们使用14个简单序列重复（SSR）引物对，分析了来自安纳托利亚六个不同地区的310份无花果材料。在结构分析中，安纳托利亚西部的材料形成了一个群体，这与其地理分布有关。此外，还鉴定出7份相同、36份同义和22份同源的无花果材料。在多点谱系（MLL）分析中，共有54份材料作为克隆分配与不同的材料匹配。研究结果将通过识别遗传多样性、遗传关系和表征所研究种群和材料的结构，促进该经济重要树种未来的种质管理和育种工作。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

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来源期刊

Folia Horticulturae Agricultural and Biological Sciences-Horticulture

CiteScore

3.40

自引率

0.00%

发文量

审稿时长

16 weeks

期刊介绍： Folia Horticulturae is an international, scientific journal published in English. It covers a broad research spectrum of aspects related to horticultural science that are of interest to a wide scientific community and have an impact on progress in both basic and applied research carried out with the use of horticultural crops and their products. The journal’s aim is to disseminate recent findings and serve as a forum for presenting views as well as for discussing important problems and prospects of modern horticulture, particularly in relation to sustainable production of high yield and quality of horticultural products, including their impact on human health.