Rotating Stomata Measurement Based on Anchor-Free Object Detection and Stomata Conductance Calculation.

IF 7.6 1区 农林科学 Q1 AGRONOMY
Plant Phenomics Pub Date : 2023-10-09 eCollection Date: 2023-01-01 DOI:10.34133/plantphenomics.0106
Fan Zhang, Bo Wang, Fuhao Lu, Xinhong Zhang
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引用次数: 0

Abstract

Stomata play an essential role in regulating water and carbon dioxide levels in plant leaves, which is important for photosynthesis. Previous deep learning-based plant stomata detection methods are based on horizontal detection. The detection anchor boxes of deep learning model are horizontal, while the angle of stomata is randomized, so it is not possible to calculate stomata traits directly from the detection anchor boxes. Additional processing of image (e.g., rotating image) is required before detecting stomata and calculating stomata traits. This paper proposes a novel approach, named DeepRSD (deep learning-based rotating stomata detection), for detecting rotating stomata and calculating stomata basic traits at the same time. Simultaneously, the stomata conductance loss function is introduced in the DeepRSD model training, which improves the efficiency of stomata detection and conductance calculation. The experimental results demonstrate that the DeepRSD model reaches 94.3% recognition accuracy for stomata of maize leaf. The proposed method can help researchers conduct large-scale studies on stomata morphology, structure, and stomata conductance models.

Abstract Image

Abstract Image

Abstract Image

基于无锚物体检测和气孔导度计算的旋转气孔测量。
气孔在调节植物叶片中的水分和二氧化碳水平方面发挥着重要作用,这对光合作用很重要。以前基于深度学习的植物气孔检测方法都是基于水平检测的。深度学习模型的检测锚盒是水平的,而气孔的角度是随机的,因此不可能直接从检测锚盒中计算气孔特征。在检测气孔和计算气孔特征之前,需要对图像进行额外的处理(例如,旋转图像)。本文提出了一种新的方法,称为DeepRSD(基于深度学习的旋转气孔检测),用于检测旋转气孔,同时计算气孔的基本特征。同时,在DeepRSD模型训练中引入了气孔电导损失函数,提高了气孔检测和电导计算的效率。实验结果表明,DeepRSD模型对玉米叶片气孔的识别准确率达到94.3%。所提出的方法可以帮助研究人员对气孔形态、结构和气孔电导模型进行大规模研究。
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来源期刊
Plant Phenomics
Plant Phenomics Multiple-
CiteScore
8.60
自引率
9.20%
发文量
26
审稿时长
14 weeks
期刊介绍: Plant Phenomics is an Open Access journal published in affiliation with the State Key Laboratory of Crop Genetics & Germplasm Enhancement, Nanjing Agricultural University (NAU) and published by the American Association for the Advancement of Science (AAAS). Like all partners participating in the Science Partner Journal program, Plant Phenomics is editorially independent from the Science family of journals. The mission of Plant Phenomics is to publish novel research that will advance all aspects of plant phenotyping from the cell to the plant population levels using innovative combinations of sensor systems and data analytics. Plant Phenomics aims also to connect phenomics to other science domains, such as genomics, genetics, physiology, molecular biology, bioinformatics, statistics, mathematics, and computer sciences. Plant Phenomics should thus contribute to advance plant sciences and agriculture/forestry/horticulture by addressing key scientific challenges in the area of plant phenomics. The scope of the journal covers the latest technologies in plant phenotyping for data acquisition, data management, data interpretation, modeling, and their practical applications for crop cultivation, plant breeding, forestry, horticulture, ecology, and other plant-related domains.
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