Comparative Study of Automated Algorithms for Brain Arteriovenous Malformation Nidus Extent Identification Using 3DRA.

IF 1.6 4区 医学 Q3 CARDIAC & CARDIOVASCULAR SYSTEMS
Camila García, Ana Paula Narata, Jianmin Liu, Yibin Fang, Ignacio Larrabide
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引用次数: 0

Abstract

Purpose: When performing a brain arteriovenous malformation (bAVMs) intervention, computer-assisted analysis of bAVMs can aid clinicians in planning precise therapeutic alternatives. Therefore, we aim to assess currently available methods for bAVMs nidus extent identification over 3DRA. To this end, we establish a unified framework to contrast them over the same dataset, fully automatising the workflows.

Materials and methods: We retrospectively collected contrast-enhanced 3DRA scans of patients with bAVMs. A segmentation network was used to automatically acquire the brain vessels segmentation for each case. We applied the nidus extent identification algorithms over each of the segmentations, computing overlap measurements against manual nidus delineations.

Results: We evaluated the methods over a private dataset with 22 3DRA scans of individuals with bAVMs. The best-performing alternatives resulted in [Formula: see text] and [Formula: see text] dice coefficient values.

Conclusions: The mathematical morphology-based approach showed higher robustness through inter-case variability. The skeleton-based approach leverages the skeleton topomorphology characteristics, while being highly sensitive to anatomical variations and the skeletonisation method employed. Overall, nidus extent identification algorithms are also limited by the quality of the raw volume, as the consequent imprecise vessel segmentation will hinder their results. Performance of the available alternatives remains subpar. This analysis allows for a better understanding of the current limitations.

Abstract Image

3DRA脑动静脉畸形Nidus范围自动识别算法的比较研究。
目的:在进行脑动静脉畸形(bAVM)干预时,计算机辅助分析bAVM可以帮助临床医生规划精确的治疗方案。因此,我们的目标是评估目前可用的通过3DRA进行bAVM nidus范围识别的方法。为此,我们建立了一个统一的框架,在同一数据集上对它们进行对比,使工作流程完全自动化。材料和方法:我们回顾性收集bAVM患者的3DRA增强扫描。使用分割网络来自动获取每个病例的脑血管分割。我们在每个分割上应用了nidus范围识别算法,根据手动nidus描绘计算重叠测量。结果:我们在私人数据集上评估了这些方法,该数据集对bAVM患者进行了22次3DRA扫描。表现最好的备选方案产生了[公式:见正文]和[公式:看正文]骰子系数值。结论:基于数学形态学的方法通过病例间变异表现出更高的稳健性。基于骨骼的方法利用了骨骼的拓扑形态学特征,同时对解剖变化和所采用的骨骼化方法高度敏感。总的来说,nidus范围识别算法也受到原始体积质量的限制,因为随之而来的不精确的血管分割将阻碍其结果。可用替代品的性能仍然不理想。这种分析可以更好地理解当前的局限性。
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来源期刊
Cardiovascular Engineering and Technology
Cardiovascular Engineering and Technology Engineering-Biomedical Engineering
CiteScore
4.00
自引率
0.00%
发文量
51
期刊介绍: Cardiovascular Engineering and Technology is a journal publishing the spectrum of basic to translational research in all aspects of cardiovascular physiology and medical treatment. It is the forum for academic and industrial investigators to disseminate research that utilizes engineering principles and methods to advance fundamental knowledge and technological solutions related to the cardiovascular system. Manuscripts spanning from subcellular to systems level topics are invited, including but not limited to implantable medical devices, hemodynamics and tissue biomechanics, functional imaging, surgical devices, electrophysiology, tissue engineering and regenerative medicine, diagnostic instruments, transport and delivery of biologics, and sensors. In addition to manuscripts describing the original publication of research, manuscripts reviewing developments in these topics or their state-of-art are also invited.
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