Reference genome for the Northern bat (Eptesicus nilssonii), a most northern bat species.

IF 3 2区 生物学 Q2 EVOLUTIONARY BIOLOGY
Veronika N Laine, Arto T Pulliainen, Thomas M Lilley
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引用次数: 0

Abstract

The northern bat (Eptesicus nilssonii) is the most northern bat species in the world. Its distribution covers whole Eurasia, and the species is thus well adapted to different habitat types. However, recent population declines have been reported and rapid conservation efforts are needed. Here we present a high-quality de novo genome assembly of a female northern bat from Finland (BLF_Eptnil_asm_v1.0). The assembly was generated using a combination of Pacbio and Omni-C technologies. The primary assembly comprises 726 scaffolds spanning 2.0 Gb, represented by a scaffold N50 of 102 Mb, a contig N50 of 66.2 Mb, and a BUSCO completeness score of 93.73%. Annotation of the assembly identified 20,250 genes. This genome will be an important resource for the conservation and evolutionary genomic studies especially in understanding how rapid environmental changes affect northern species.

北方蝙蝠的参考基因组(Eptesicus nilsonii),一种最北方的蝙蝠物种。
北方蝙蝠(Eptesicus nilsonii)是世界上最北方的蝙蝠物种。它的分布覆盖了整个欧亚大陆,因此该物种很好地适应了不同的栖息地类型。然而,据报道,最近的种群数量有所下降,需要迅速开展保护工作。在这里,我们展示了一个来自芬兰的雌性北方蝙蝠的高质量从头基因组组装(BLF_Eptnil_asm_v1.0)。该组装是使用Pacbio和Omni-C技术的组合生成的。初级组装包括726个跨越2.0Gb的支架,以102Mb的支架N50、66.2Mb的重叠群N50和93.73%的BUSCO完整性得分为代表。组装的注释鉴定了20250个基因。该基因组将是保护和进化基因组研究的重要资源,特别是在了解快速环境变化如何影响北方物种方面。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Journal of Heredity
Journal of Heredity 生物-遗传学
CiteScore
5.20
自引率
6.50%
发文量
63
审稿时长
6-12 weeks
期刊介绍: Over the last 100 years, the Journal of Heredity has established and maintained a tradition of scholarly excellence in the publication of genetics research. Virtually every major figure in the field has contributed to the journal. Established in 1903, Journal of Heredity covers organismal genetics across a wide range of disciplines and taxa. Articles include such rapidly advancing fields as conservation genetics of endangered species, population structure and phylogeography, molecular evolution and speciation, molecular genetics of disease resistance in plants and animals, genetic biodiversity and relevant computer programs.
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