Developmental validation of a novel multiple genotyping assay with 24 Canine STR loci.

IF 7.9 2区 农林科学 Q1 VETERINARY SCIENCES
Veterinary Quarterly Pub Date : 2023-12-01 Epub Date: 2023-10-20 DOI:10.1080/01652176.2023.2262521
Weian Du, Xueyuan Liu, Litao Huang, Yangyang Zheng, Weibin Wu, Qian Huang, Tao Li, Rongxing Wei, Qianyong Yang, Shiying Deng, Jin Liao, Chao Liu, Ling Chen
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引用次数: 0

Abstract

Canine individual identification and parentage testing are essential in various fields, including forensics and breeding programs. This study aimed to develop and validate the Canine 25 A kit, a multiplex polymerase chain reaction (PCR) system designed to address these critical requirements. This novel system enables the simultaneous amplification of 24 canine autosomal short tandem repeat (STR) loci and one sex-determining marker. Validation of the Canine 25 A kit was conducted following the Scientific Working Group on DNA Analysis Methods (SWGDAM) guidelines, demonstrating significant sensitivity, high inhibitor tolerance, canine specificity within a mixture, species specificity, and precision in genotype determination. The Canine 25 A kit was crucial in resolving several forensic cases, such as casework samples from a dog attack incident and parentage determination. Its effectiveness in genotyping these samples highlights its significance in forensic applications. Population genetic parameter analysis revealed a high discriminatory power, as indicated by the calculated combined discrimination power (CDP) values for each breed exceeding 0.999 999 999 999, while the combined power of exclusion (CPE) surpassed 0.9999. Overall, the Canine 25 A kit offers a precise and dependable tool for canine individual identification and parentage determination.

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用24个犬STR基因座进行新型多基因分型试验的开发验证。
犬类个体鉴定和亲子鉴定在包括法医学和繁殖计划在内的各个领域都至关重要。本研究旨在开发和验证犬25A试剂盒,这是一种多重聚合酶链式反应(PCR)系统,旨在满足这些关键要求。这种新系统能够同时扩增24个犬常染色体短串联重复序列(STR)基因座和一个性别决定标记。犬25A试剂盒的验证是根据DNA分析方法科学工作组(SWGDAM)指南进行的,证明了显著的敏感性、高抑制剂耐受性、犬在混合物中的特异性、物种特异性和基因型测定的准确性。犬25A试剂盒在解决几起法医案件中至关重要,例如狗袭击事件的个案样本和亲子关系的确定。它在对这些样本进行基因分型方面的有效性凸显了它在法医学应用中的重要性。群体遗传参数分析显示,每个品种的综合判别力(CDP)值超过0.999 999 999 999,而综合排除力(CPE)超过0.9999。总的来说,犬类25A试剂盒为犬类个体识别和亲子关系确定提供了一个精确可靠的工具。
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来源期刊
Veterinary Quarterly
Veterinary Quarterly VETERINARY SCIENCES-
CiteScore
13.10
自引率
1.60%
发文量
18
审稿时长
>24 weeks
期刊介绍: Veterinary Quarterly is an international open access journal which publishes high quality review articles and original research in the field of veterinary science and animal diseases. The journal publishes research on a range of different animal species and topics including: - Economically important species such as domesticated and non-domesticated farm animals, including avian and poultry diseases; - Companion animals (dogs, cats, horses, pocket pets and exotics); - Wildlife species; - Infectious diseases; - Diagnosis; - Treatment including pharmacology and vaccination
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