Effects of l-ascorbic acid (C6H8O6: Vit-C) on collagen amino acids: DFT study

IF 3 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Uliana Y. Chugaeva, Mahmoud Raouf, Natalia S. Morozova, Leila Mahdavian
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Abstract

Vitamin C plays a very important role in the repair of connective tissue, especially for sports whose training causes the most damage to this tissue. Therefore, many people believe that L-ascorbic acid (C6H8O6: vitamin C) reduces the recovery time between sports exercises. The most abundant form of structural protein in the body is collagen. Collagen is characterized by a high concentration of the three amino acids glycine (Gly), proline (Pro), and hydroxyproline (Hyp), which creates its characteristic triple helix structure. Therefore, in this study, the effect of vitamin C presence on the sequence, interaction, and orientation of amino acids for collagen formation is investigated using computational simulation. This study aimed to investigate the mechanism of action of vitamin C in terms of thermodynamics and structure of the reaction. The calculations are performed using density function theory (DFT) by the base set of B3LYP/6-311++G (p,d). The results show that the presence of vitamin C is effective in the formation of collagen protein for this interaction and the mechanism of amino acid sequence (Gly-Hyp-Pro) is better in the formation of collagen protein in the presence of vitamin C. The presence of Vit-C in the formation and direction of hydroxyproline (Hyp) causes its separation from the prolyl 5-hydroxylase enzyme. In the absence of vitamin C, the reaction stops at this stage and proline cannot be converted into hydroxyproline. The computational data shows vitamin C prevents unwanted interactions and directs amino acid reactions to repair connective tissue (collagen). Therefore, vitamin C acts as a cofactor in the Prolyl 5-Hydroxylase enzyme and causes it to convert proline to hydroxyl.

Abstract Image

L-抗坏血酸(C6H8O6:Vit-C)对胶原氨基酸的影响:DFT研究。
维生素C在结缔组织的修复中起着非常重要的作用,尤其是在训练对结缔组织损伤最大的运动中。因此,许多人认为L-抗坏血酸(C6H8O6:维生素C)可以缩短运动之间的恢复时间。体内最丰富的结构蛋白是胶原蛋白。胶原蛋白的特征是三种氨基酸的高浓度甘氨酸(Gly)、脯氨酸(Pro)和羟脯氨酸(Hyp),这形成了其特有的三螺旋结构。因此,在本研究中,使用计算模拟研究了维生素C的存在对胶原蛋白形成氨基酸的序列、相互作用和方向的影响。本研究旨在从反应的热力学和结构方面探讨维生素C的作用机制。利用密度函数理论(DFT),以B3LYP/6-311++G(p,d)为基集进行计算。结果表明,维生素C的存在对这种相互作用的胶原蛋白的形成是有效的,并且氨基酸序列(Gly-Hyp-Pro)的机制在维生素C存在的情况下对胶原蛋白的形成更好。在缺乏维生素C的情况下,反应在这个阶段停止,脯氨酸不能转化为羟脯氨酸。计算数据显示,维生素C可以防止不必要的相互作用,并引导氨基酸反应修复结缔组织(胶原蛋白)。因此,维生素C在脯氨酸5-羟化酶中起辅助因子的作用,使其将脯氨酸转化为羟基。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Amino Acids
Amino Acids 生物-生化与分子生物学
CiteScore
6.40
自引率
5.70%
发文量
99
审稿时长
2.2 months
期刊介绍: Amino Acids publishes contributions from all fields of amino acid and protein research: analysis, separation, synthesis, biosynthesis, cross linking amino acids, racemization/enantiomers, modification of amino acids as phosphorylation, methylation, acetylation, glycosylation and nonenzymatic glycosylation, new roles for amino acids in physiology and pathophysiology, biology, amino acid analogues and derivatives, polyamines, radiated amino acids, peptides, stable isotopes and isotopes of amino acids. Applications in medicine, food chemistry, nutrition, gastroenterology, nephrology, neurochemistry, pharmacology, excitatory amino acids are just some of the topics covered. Fields of interest include: Biochemistry, food chemistry, nutrition, neurology, psychiatry, pharmacology, nephrology, gastroenterology, microbiology
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