Classification of Southeast Asian mints (Mentha spp.) based on simple sequence repeat markers.

IF 2 4区 农林科学 Q2 AGRONOMY
Breeding Science Pub Date : 2022-04-01 Epub Date: 2022-03-09 DOI:10.1270/jsbbs.21058
Yuri Fukui, Moeko Saito, Natsuno Nakamura, Taichi Mizuno, Shuichi Sato, Mayu Tsukuda, Saori Nakaoka, Keita Tsuboi, Azusa Sasaki, Kouji Kuramochi, Panida Boonyaritthongchai, Nichapat Kaewmanee, Krit Thirapanmethee, Mullika Traidej Chomnawang, Bhanubong Bongcheewin, Thuy Linh Nguyen, Huong Lan Thi Nguyen, Huong Thi Le, Shigehisa Okamoto, Takako Nakamura, Yasushi Nakamura, Nakao Kubo
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Abstract

Mentha is a complex genus encompassing many species as a consequence of their interspecific hybridization and polyploidy. Southeast Asian mints have been poorly distinguished though they are widely used for culinary and medical purposes. In this study, we have analyzed Southeast Asian mints and known varieties as well as a related Lamiaceae species (Nepeta sp.) using simple sequence repeat (SSR) markers and leaf morphology. Two types of mints were clearly distinguished based on their venation pattern and leaf shape index. We developed 12 SSR markers that allowed good amplification in the Mentha and another Lamiaceae species. In the SSR-based phylogram, the Mentha lines could be delimited into groups I-VI. The Southeast Asian mints divided into groups I and II, and the phylogram separated most of the available species, with groups I and II containing the known species M. × cordifolia and M. arvensis, respectively. The separation of the two groups was supported by a population structure analysis. The SSR markers developed in this study enabled the simultaneous classification of mints and will help improve our understanding of the genetic composition of known mint varieties and as yet unclassified Southeast Asian mints.

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基于简单序列重复标记的东南亚薄荷属植物分类。
薄荷是一个复杂的属,包括许多种,由于它们的种间杂交和多倍体的结果。尽管东南亚薄荷被广泛用于烹饪和医疗目的,但它们的区别却很差。本研究利用SSR标记和叶片形态分析了东南亚薄荷、已知薄荷品种以及一种薄荷科植物。根据薄荷的脉状形态和叶形指数,可以清楚地区分两种薄荷。我们开发了12个SSR标记,可以在薄荷和另一个Lamiaceae物种中进行良好的扩增。在基于ssr的系统图谱中,薄荷系可划分为I-VI类群。东南亚薄荷属植物分为I类和II类,其系统谱区分了大部分可用种,其中I类和II类分别含有已知种M. x cordifolia和M. arvensis。种群结构分析支持了这两组的分离。本研究开发的SSR标记实现了薄荷的同时分类,将有助于提高我们对已知薄荷品种和尚未分类的东南亚薄荷的遗传组成的理解。
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来源期刊
Breeding Science
Breeding Science 农林科学-农艺学
CiteScore
4.90
自引率
4.20%
发文量
37
审稿时长
1.5 months
期刊介绍: Breeding Science is published by the Japanese Society of Breeding. Breeding Science publishes research papers, notes and reviews related to breeding. Research Papers are standard original articles. Notes report new cultivars, breeding lines, germplasms, genetic stocks, mapping populations, database, software, and techniques significant and useful for breeding. Reviews summarize recent and historical events related breeding. Manuscripts should be submitted by corresponding author. Corresponding author must have obtained permission from all authors prior to submission. Correspondence, proofs, and charges of excess page and color figures should be handled by the corresponding author.
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