Visualization for epidemiological modelling: challenges, solutions, reflections and recommendations.

Jason Dykes, Alfie Abdul-Rahman, Daniel Archambault, Benjamin Bach, Rita Borgo, Min Chen, Jessica Enright, Hui Fang, Elif E Firat, Euan Freeman, Tuna Gönen, Claire Harris, Radu Jianu, Nigel W John, Saiful Khan, Andrew Lahiff, Robert S Laramee, Louise Matthews, Sibylle Mohr, Phong H Nguyen, Alma A M Rahat, Richard Reeve, Panagiotis D Ritsos, Jonathan C Roberts, Aidan Slingsby, Ben Swallow, Thomas Torsney-Weir, Cagatay Turkay, Robert Turner, Franck P Vidal, Qiru Wang, Jo Wood, Kai Xu
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引用次数: 10

Abstract

We report on an ongoing collaboration between epidemiological modellers and visualization researchers by documenting and reflecting upon knowledge constructs-a series of ideas, approaches and methods taken from existing visualization research and practice-deployed and developed to support modelling of the COVID-19 pandemic. Structured independent commentary on these efforts is synthesized through iterative reflection to develop: evidence of the effectiveness and value of visualization in this context; open problems upon which the research communities may focus; guidance for future activity of this type and recommendations to safeguard the achievements and promote, advance, secure and prepare for future collaborations of this kind. In describing and comparing a series of related projects that were undertaken in unprecedented conditions, our hope is that this unique report, and its rich interactive supplementary materials, will guide the scientific community in embracing visualization in its observation, analysis and modelling of data as well as in disseminating findings. Equally we hope to encourage the visualization community to engage with impactful science in addressing its emerging data challenges. If we are successful, this showcase of activity may stimulate mutually beneficial engagement between communities with complementary expertise to address problems of significance in epidemiology and beyond. See https://ramp-vis.github.io/RAMPVIS-PhilTransA-Supplement/. This article is part of the theme issue 'Technical challenges of modelling real-life epidemics and examples of overcoming these'.

Abstract Image

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流行病学建模的可视化:挑战、解决方案、反思和建议。
我们通过记录和反思知识构建(取自现有可视化研究和实践的一系列思想、方法和方法),报告流行病学建模人员和可视化研究人员之间正在进行的合作,这些知识构建是为支持COVID-19大流行建模而部署和开发的。通过反复反思,对这些努力进行结构化的独立评论,以发展:在这种情况下可视化的有效性和价值的证据;研究界可能关注的开放性问题;为今后这类活动提供指导,并建议维护成果,促进、推进、保障并为今后这类合作做好准备。在描述和比较在前所未有的条件下进行的一系列相关项目时,我们希望这份独特的报告及其丰富的互动式补充材料将指导科学界在其观察、分析和数据建模以及传播发现时采用可视化。同样,我们希望鼓励可视化社区参与有影响力的科学,以解决其新兴的数据挑战。如果我们取得成功,这一活动的展示可能会刺激具有互补专业知识的社区之间的互利接触,以解决流行病学和其他领域的重要问题。见https://ramp-vis.github.io/RAMPVIS-PhilTransA-Supplement/。这篇文章是主题“模拟现实生活中的流行病的技术挑战和克服这些挑战的例子”的一部分。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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