{"title":"Population Epigenetics: The Extent of DNA Methylation Variation in Wild Animal Populations.","authors":"Valentine Chapelle, Frédéric Silvestre","doi":"10.3390/epigenomes6040031","DOIUrl":null,"url":null,"abstract":"<p><p>Population epigenetics explores the extent of epigenetic variation and its dynamics in natural populations encountering changing environmental conditions. In contrast to population genetics, the basic concepts of this field are still in their early stages, especially in animal populations. Epigenetic variation may play a crucial role in phenotypic plasticity and local adaptation as it can be affected by the environment, it is likely to have higher spontaneous mutation rate than nucleotide sequences do, and it may be inherited via non-mendelian processes. In this review, we aim to bring together natural animal population epigenetic studies to generate new insights into ecological epigenetics and its evolutionary implications. We first provide an overview of the extent of DNA methylation variation and its autonomy from genetic variation in wild animal population. Second, we discuss DNA methylation dynamics which create observed epigenetic population structures by including basic population genetics processes. Then, we highlight the relevance of DNA methylation variation as an evolutionary mechanism in the extended evolutionary synthesis. Finally, we suggest new research directions by highlighting gaps in the knowledge of the population epigenetics field. As for our results, DNA methylation diversity was found to reveal parameters that can be used to characterize natural animal populations. Some concepts of population genetics dynamics can be applied to explain the observed epigenetic structure in natural animal populations. The set of recent advancements in ecological epigenetics, especially in transgenerational epigenetic inheritance in wild animal population, might reshape the way ecologists generate predictive models of the capacity of organisms to adapt to changing environments.</p>","PeriodicalId":55768,"journal":{"name":"Epigenomes","volume":null,"pages":null},"PeriodicalIF":2.5000,"publicationDate":"2022-09-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9589984/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Epigenomes","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.3390/epigenomes6040031","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0
Abstract
Population epigenetics explores the extent of epigenetic variation and its dynamics in natural populations encountering changing environmental conditions. In contrast to population genetics, the basic concepts of this field are still in their early stages, especially in animal populations. Epigenetic variation may play a crucial role in phenotypic plasticity and local adaptation as it can be affected by the environment, it is likely to have higher spontaneous mutation rate than nucleotide sequences do, and it may be inherited via non-mendelian processes. In this review, we aim to bring together natural animal population epigenetic studies to generate new insights into ecological epigenetics and its evolutionary implications. We first provide an overview of the extent of DNA methylation variation and its autonomy from genetic variation in wild animal population. Second, we discuss DNA methylation dynamics which create observed epigenetic population structures by including basic population genetics processes. Then, we highlight the relevance of DNA methylation variation as an evolutionary mechanism in the extended evolutionary synthesis. Finally, we suggest new research directions by highlighting gaps in the knowledge of the population epigenetics field. As for our results, DNA methylation diversity was found to reveal parameters that can be used to characterize natural animal populations. Some concepts of population genetics dynamics can be applied to explain the observed epigenetic structure in natural animal populations. The set of recent advancements in ecological epigenetics, especially in transgenerational epigenetic inheritance in wild animal population, might reshape the way ecologists generate predictive models of the capacity of organisms to adapt to changing environments.
种群表观遗传学探索的是在环境条件不断变化的自然种群中表观遗传变异的程度及其动态变化。与群体遗传学相比,这一领域的基本概念仍处于早期阶段,尤其是在动物群体中。表观遗传变异可能在表型可塑性和局部适应性方面发挥关键作用,因为它可能受环境影响,自发突变率可能高于核苷酸序列,而且可能通过非孟德尔过程遗传。在这篇综述中,我们旨在汇集自然动物种群表观遗传学研究,从而对生态表观遗传学及其对进化的影响产生新的认识。首先,我们概述了野生动物种群中 DNA 甲基化变异的程度及其与遗传变异的独立性。其次,我们讨论了 DNA 甲基化的动态变化,这种动态变化包括基本的种群遗传学过程,从而形成了观察到的表观遗传种群结构。然后,我们强调了 DNA 甲基化变异作为扩展进化综合中的一种进化机制的相关性。最后,我们通过强调种群表观遗传学领域的知识空白,提出了新的研究方向。就我们的研究结果而言,DNA甲基化多样性揭示了可用于描述自然动物种群特征的参数。种群遗传学动力学的一些概念可用于解释自然动物种群中观察到的表观遗传结构。生态表观遗传学的一系列最新进展,特别是野生动物种群中的跨代表观遗传,可能会重塑生态学家对生物适应不断变化的环境的能力生成预测模型的方式。