{"title":"Identification of critical residues of O-antigen-modifying O-acetyltransferase B (OacB) of Shigella flexneri.","authors":"Munazza I Rajput, Naresh K Verma","doi":"10.1186/s12860-022-00415-8","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Shigellosis is an acute gastrointestinal disease caused primarily by the bacterium Shigella flexneri. Upon ingestion, S. flexneri initiates a serotype-specific immune response that targets the O-antigen of the pathogen's lipopolysaccharide. O-antigen subunits are modified by the addition of chemical moieties, which give rise to new serotypes of S. flexneri. Nineteen different serotypes of S. flexneri have been recognized. A recently identified O-antigen-modifying enzyme, O-acetyltransferase B (OacB), which adds an acetyl residue at either position 3 or 4 of Rhamnose<sup>III</sup> (3/4-O-acetylation) in serotypes 1a, 1b, 2a, 5a, 7a, Y, and 6 and position 6 of N- acetylglucosamine (6-O-acetylation) in serotypes 2a, 3a, Y and Yv of the O-antigen subunits. Critical residues in other proteins involved in O-antigen modifications such as glucosyltransferases (Gtrs) and acetyltransferase (Oac) of S. flexneri have been identified, whereas identification of important amino acids in OacB function is yet to be determined.</p><p><strong>Results: </strong>Hydrophobicity analysis showed that OacB is a transmembrane protein with 11 transmembrane segments, 12 loops, and periplasmic N- and cytoplasmic C- termini. Bioinformatics analyses revealed that OacB contains acetyltransferase-3 domain and several conserved residues. Using site-directed mutagenesis, selected amino acids were mutated to alanine to elucidate their role in the mechanism of action of OacB. Seven amino acids R47, H58, F98, W71, R116, R119, and S146 were found critical for the OacB function.</p><p><strong>Conclusion: </strong>In the absence of a three-dimensional structure of the serotype converting enzyme, O-acetyltransferase B (OacB), a clear role of important residues in the mechanism of action is precluded. Therefore, in this study, using site-directed mutagenesis, seven residues critical to the function of OacB were identified. The lack of agglutination of cell expressing mutant OacB in the presence of the antiserum indicated the functional role of the corresponding residues. Hence, this study provides significant information about key residues in OacB which might be involved in forming the catalytic sites of this O-antigen modifying enzyme of S. flexneri.</p>","PeriodicalId":2,"journal":{"name":"ACS Applied Bio Materials","volume":null,"pages":null},"PeriodicalIF":4.6000,"publicationDate":"2022-03-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8952252/pdf/","citationCount":"1","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"ACS Applied Bio Materials","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1186/s12860-022-00415-8","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MATERIALS SCIENCE, BIOMATERIALS","Score":null,"Total":0}
引用次数: 1
Abstract
Background: Shigellosis is an acute gastrointestinal disease caused primarily by the bacterium Shigella flexneri. Upon ingestion, S. flexneri initiates a serotype-specific immune response that targets the O-antigen of the pathogen's lipopolysaccharide. O-antigen subunits are modified by the addition of chemical moieties, which give rise to new serotypes of S. flexneri. Nineteen different serotypes of S. flexneri have been recognized. A recently identified O-antigen-modifying enzyme, O-acetyltransferase B (OacB), which adds an acetyl residue at either position 3 or 4 of RhamnoseIII (3/4-O-acetylation) in serotypes 1a, 1b, 2a, 5a, 7a, Y, and 6 and position 6 of N- acetylglucosamine (6-O-acetylation) in serotypes 2a, 3a, Y and Yv of the O-antigen subunits. Critical residues in other proteins involved in O-antigen modifications such as glucosyltransferases (Gtrs) and acetyltransferase (Oac) of S. flexneri have been identified, whereas identification of important amino acids in OacB function is yet to be determined.
Results: Hydrophobicity analysis showed that OacB is a transmembrane protein with 11 transmembrane segments, 12 loops, and periplasmic N- and cytoplasmic C- termini. Bioinformatics analyses revealed that OacB contains acetyltransferase-3 domain and several conserved residues. Using site-directed mutagenesis, selected amino acids were mutated to alanine to elucidate their role in the mechanism of action of OacB. Seven amino acids R47, H58, F98, W71, R116, R119, and S146 were found critical for the OacB function.
Conclusion: In the absence of a three-dimensional structure of the serotype converting enzyme, O-acetyltransferase B (OacB), a clear role of important residues in the mechanism of action is precluded. Therefore, in this study, using site-directed mutagenesis, seven residues critical to the function of OacB were identified. The lack of agglutination of cell expressing mutant OacB in the presence of the antiserum indicated the functional role of the corresponding residues. Hence, this study provides significant information about key residues in OacB which might be involved in forming the catalytic sites of this O-antigen modifying enzyme of S. flexneri.
背景:志贺氏菌病是一种主要由福氏志贺氏菌引起的急性胃肠道疾病。摄入后,福氏沙门氏菌启动血清型特异性免疫反应,目标是病原体脂多糖的o抗原。o抗原亚基通过添加化学部分进行修饰,从而产生新的弗氏沙门氏菌血清型。已经确认了19种不同的弗氏沙门氏菌血清型。最近发现了o抗原修饰酶o -乙酰转移酶B (OacB),它在血清型1a、1b、2a、5a、7a、Y和6的鼠李糖iii的3或4位(3/4- o -乙酰化)和血清型2a、3a、Y和Yv的N-乙酰氨基葡萄糖的6位(6- o -乙酰化)上添加乙酰基残基。其他参与o抗原修饰的蛋白如葡萄糖基转移酶(Gtrs)和乙酰基转移酶(Oac)的关键残基已经被确定,而OacB功能的重要氨基酸的鉴定尚未确定。结果:疏水性分析表明,OacB是一种跨膜蛋白,具有11个跨膜节段,12个环,胞质周围N-和胞质C-端。生物信息学分析表明,OacB含有乙酰转移酶-3结构域和几个保守残基。利用定点诱变技术,将选择的氨基酸突变为丙氨酸,以阐明其在OacB作用机制中的作用。发现7个氨基酸R47、H58、F98、W71、R116、R119和S146对oach功能至关重要。结论:由于缺乏血清型转换酶o -乙酰转移酶B (OacB)的三维结构,排除了重要残基在作用机制中的明确作用。因此,在本研究中,使用定点诱变技术,鉴定了7个对OacB功能至关重要的残基。在抗血清存在的情况下,表达OacB突变体的细胞缺乏凝集,表明相应残基的功能作用。因此,该研究提供了可能参与形成flexneri o抗原修饰酶催化位点的OacB关键残基的重要信息。