Identification of histoplasma-specific peptides in human urine.

International Journal of Peptides Pub Date : 2012-01-01 Epub Date: 2012-03-26 DOI:10.1155/2012/621329
David K Crockett, Mark M Kushnir, Joann L Cloud, Edward R Ashwood, Alan L Rockwood
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引用次数: 5

Abstract

Histoplasmosis is a severe dimorphic fungus infection, which is often difficult to diagnose due to similarity in symptoms to other diseases and lack of specific diagnostic tests. Urine samples from histoplasma-antigen-positive patients and appropriate controls were prepared using various sample preparation strategies including immunoenrichment, ultrafiltration, high-abundant protein depletion, deglycosylation, reverse-phase fractions, and digest using various enzymes. Samples were then analyzed by nanospray tandem mass spectrometry. Accurate mass TOF scans underwent molecular feature extraction and statistical analysis for unique disease makers, and acquired MS/MS data were searched against known human and histoplasma proteins. In human urine, some 52 peptides from 37 Histoplasma proteins were identified with high confidence. This is the first report of identification of a large number of Histoplasma-specific peptides from immunoassay-positive patient samples using tandem mass spectrometry and bioinformatics techniques. These findings may lead to novel diagnostic markers for histoplasmosis in human urine.

Abstract Image

人尿中组织浆特异性肽的鉴定。
组织胞浆菌病是一种严重的二型真菌感染,由于症状与其他疾病相似,缺乏专门的诊断方法,往往难以诊断。组织血浆抗原阳性患者和适当对照组的尿液样本采用多种样品制备策略,包括免疫富集、超滤、高丰蛋白耗尽、去糖基化、反相馏分和各种酶消化。然后用纳米喷雾串联质谱法对样品进行分析。精确的质量TOF扫描对独特的疾病制造者进行分子特征提取和统计分析,并根据已知的人蛋白和组织浆蛋白检索获得的MS/MS数据。在人尿中,37种组织浆蛋白中的52种多肽被高可信度地鉴定出来。这是首次使用串联质谱法和生物信息学技术从免疫测定阳性患者样本中鉴定出大量组织浆特异性肽的报告。这些发现可能会导致新的诊断标记组织浆菌病在人类尿液。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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