Modeling present and future climate risk of dengue outbreak, a case study in New Caledonia.

Noé Ochida, Morgan Mangeas, Myrielle Dupont-Rouzeyrol, Cyril Dutheil, Carole Forfait, Alexandre Peltier, Elodie Descloux, Christophe Menkes
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引用次数: 13

Abstract

Background: Dengue dynamics result from the complex interactions between the virus, the host and the vector, all being under the influence of the environment. Several studies explored the link between weather and dengue dynamics and some investigated the impact of climate change on these dynamics. Most attempted to predict incidence rate at a country scale or assess the environmental suitability at a global or regional scale. Here, we propose a new approach which consists in modeling the risk of dengue outbreak at a local scale according to climate conditions and study the evolution of this risk taking climate change into account. We apply this approach in New Caledonia, where high quality data are available.

Methods: We used a statistical estimation of the effective reproduction number (Rt) based on case counts to create a categorical target variable : epidemic week/non-epidemic week. A machine learning classifier has been trained using relevant climate indicators in order to estimate the probability for a week to be epidemic under current climate data and this probability was then estimated under climate change scenarios.

Results: Weekly probability of dengue outbreak was best predicted with the number of days when maximal temperature exceeded 30.8°C and the mean of daily precipitation over 80 and 60 days prior to the predicted week respectively. According to scenario RCP8.5, climate will allow dengue outbreak every year in New Caledonia if the epidemiological and entomological contexts remain the same.

Conclusion: We identified locally relevant climatic factor driving dengue outbreaks in New Caledonia and assessed the inter-annual and seasonal risk of dengue outbreak under different climate change scenarios up to the year 2100. We introduced a new modeling approach to estimate the risk of dengue outbreak depending on climate conditions. This approach is easily reproducible in other countries provided that reliable epidemiological and climate data are available.

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Abstract Image

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模拟登革热暴发的当前和未来气候风险——新喀里多尼亚的一个案例研究。
背景:登革热动力学是病毒、宿主和媒介之间复杂相互作用的结果,它们都受到环境的影响。一些研究探讨了天气与登革热动态之间的联系,一些研究调查了气候变化对这些动态的影响。大多数试图在国家范围内预测发病率或在全球或区域范围内评估环境适宜性。在此,我们提出了一种新的方法,即根据气候条件在当地范围内模拟登革热暴发的风险,并研究这种风险在考虑气候变化的情况下的演变。我们在新喀里多尼亚采用了这种方法,那里有高质量的数据。方法:根据病例数对有效再现数(Rt)进行统计估计,创建分类目标变量:流行周/非流行周。使用相关气候指标训练了一个机器学习分类器,以便在当前气候数据下估计一周内流行的概率,然后在气候变化情景下估计这一概率。结果:以预测周前最高气温超过30.8℃的天数和平均日降水量分别超过预测周前80天和60 d预测登革热周暴发概率最佳。根据RCP8.5情景,如果流行病学和昆虫学环境保持不变,气候将允许每年在新喀里多尼亚暴发登革热。结论:我们确定了导致新喀里多尼亚登革热暴发的当地相关气候因素,并评估了到2100年不同气候变化情景下登革热暴发的年际和季节风险。我们引入了一种新的建模方法,根据气候条件估计登革热爆发的风险。只要有可靠的流行病学和气候数据,这种方法很容易在其他国家复制。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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