Sean Sebastian Hughes, Marcus M K Nielsen, Rasmus Voersaa Jonsbo, Carsten Uhd Nielsen, Frants Roager Lauritsen, Bala Krishna Prabhala
{"title":"BeerMIMS: Exploring the Use of Membrane-Inlet Mass Spectrometry (MIMS) Coupled to KNIME for the Characterization of Danish Beers.","authors":"Sean Sebastian Hughes, Marcus M K Nielsen, Rasmus Voersaa Jonsbo, Carsten Uhd Nielsen, Frants Roager Lauritsen, Bala Krishna Prabhala","doi":"10.1177/14690667211073317","DOIUrl":null,"url":null,"abstract":"<p><p>Beer is a complex mix of more than 7700 compounds, around 800 of which are volatile. While GC-MS has been actively employed in the analysis of the volatome of beer, this method is challenged by the complex nature of the sample. Herein, we explored the possible of using membrane-inlet mass spectrometry (MIMS) coupled to KNIME to characterize local Danish beers. KNIME stands for Konstanz Information Miner and is a free open-source data processing software which comes with several prebuilt nodes, that, when organized, result in data processing workflows allowing swift analysis of data with outputs that can be visualized in the desired format. KNIME has been shown to be promising in automation of large datasets and requires very little computing power. In fact, most of the computations can be carried out on a regular PC. Herein, we have utilized a KNIME workflow for data visualization of MIMS data to understand the global volatome of beers. Feature identification was not possible as of now but with a combination of MIMS and a KNIME workflow, we were able to distinguish beers from different micro-breweries located in Denmark, laying the foundation for the use of MIMS in future analysis of the beer volatome.</p>","PeriodicalId":12007,"journal":{"name":"European Journal of Mass Spectrometry","volume":"27 6","pages":"266-271"},"PeriodicalIF":1.1000,"publicationDate":"2021-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"5","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"European Journal of Mass Spectrometry","FirstCategoryId":"92","ListUrlMain":"https://doi.org/10.1177/14690667211073317","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2022/1/6 0:00:00","PubModel":"Epub","JCR":"Q4","JCRName":"PHYSICS, ATOMIC, MOLECULAR & CHEMICAL","Score":null,"Total":0}
引用次数: 5
Abstract
Beer is a complex mix of more than 7700 compounds, around 800 of which are volatile. While GC-MS has been actively employed in the analysis of the volatome of beer, this method is challenged by the complex nature of the sample. Herein, we explored the possible of using membrane-inlet mass spectrometry (MIMS) coupled to KNIME to characterize local Danish beers. KNIME stands for Konstanz Information Miner and is a free open-source data processing software which comes with several prebuilt nodes, that, when organized, result in data processing workflows allowing swift analysis of data with outputs that can be visualized in the desired format. KNIME has been shown to be promising in automation of large datasets and requires very little computing power. In fact, most of the computations can be carried out on a regular PC. Herein, we have utilized a KNIME workflow for data visualization of MIMS data to understand the global volatome of beers. Feature identification was not possible as of now but with a combination of MIMS and a KNIME workflow, we were able to distinguish beers from different micro-breweries located in Denmark, laying the foundation for the use of MIMS in future analysis of the beer volatome.
啤酒是超过7700种化合物的复杂混合物,其中约800种是挥发性的。虽然气相色谱-质谱法已被积极应用于啤酒挥发物的分析,但这种方法受到样品复杂性的挑战。在这里,我们探索了使用膜入口质谱(MIMS)耦合KNIME来表征丹麦当地啤酒的可能性。KNIME代表Konstanz Information Miner,是一个免费的开源数据处理软件,它附带了几个预构建的节点,当组织时,会导致数据处理工作流,允许快速分析数据,输出可以以所需的格式可视化。KNIME已被证明在大型数据集的自动化方面很有前途,并且只需要很少的计算能力。事实上,大多数计算都可以在普通的个人电脑上进行。在此,我们利用KNIME工作流对MIMS数据进行数据可视化,以了解啤酒的全球挥发。到目前为止,特征识别是不可能的,但结合MIMS和KNIME工作流程,我们能够区分来自丹麦不同微型啤酒厂的啤酒,为MIMS在未来啤酒挥发分析中的使用奠定了基础。
期刊介绍:
JMS - European Journal of Mass Spectrometry, is a peer-reviewed journal, devoted to the publication of innovative research in mass spectrometry. Articles in the journal come from proteomics, metabolomics, petroleomics and other areas developing under the umbrella of the “omic revolution”.