Towards Reinforced Brain Tumor Segmentation on MRI Images Based on Temperature Changes on Pathologic Area.

IF 3.3 Q2 ENGINEERING, BIOMEDICAL
International Journal of Biomedical Imaging Pub Date : 2019-03-03 eCollection Date: 2019-01-01 DOI:10.1155/2019/1758948
Abdelmajid Bousselham, Omar Bouattane, Mohamed Youssfi, Abdelhadi Raihani
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引用次数: 41

Abstract

Brain tumor segmentation is the process of separating the tumor from normal brain tissues; in clinical routine, it provides useful information for diagnosis and treatment planning. However, it is still a challenging task due to the irregular form and confusing boundaries of tumors. Tumor cells thermally represent a heat source; their temperature is high compared to normal brain cells. The main aim of the present paper is to demonstrate that thermal information of brain tumors can be used to reduce false positive and false negative results of segmentation performed in MRI images. Pennes bioheat equation was solved numerically using the finite difference method to simulate the temperature distribution in the brain; Gaussian noises of ±2% were added to the simulated temperatures. Canny edge detector was used to detect tumor contours from the calculated thermal map, as the calculated temperature showed a large gradient in tumor contours. The proposed method is compared to Chan-Vese based level set segmentation method applied to T1 contrast-enhanced and Flair MRI images of brains containing tumors with ground truth. The method is tested in four different phantom patients by considering different tumor volumes and locations and 50 synthetic patients taken from BRATS 2012 and BRATS 2013. The obtained results in all patients showed significant improvement using the proposed method compared to segmentation by level set method with an average of 0.8% of the tumor area and 2.48% of healthy tissue was differentiated using thermal images only. We conclude that tumor contours delineation based on tumor temperature changes can be exploited to reinforce and enhance segmentation algorithms in MRI diagnostic.

Abstract Image

Abstract Image

Abstract Image

基于病理区域温度变化的MRI图像强化脑肿瘤分割。
脑肿瘤分割是将肿瘤从正常脑组织中分离出来的过程;在临床常规中,它为诊断和治疗计划提供了有用的信息。然而,由于肿瘤的形状不规则,边界混乱,这仍然是一项具有挑战性的任务。肿瘤细胞在热上代表热源;它们的温度比正常脑细胞高。本文的主要目的是证明脑肿瘤的热信息可以用来减少在MRI图像中进行分割的假阳性和假阴性结果。采用有限差分法对Pennes生物热方程进行数值求解,模拟脑内温度分布;在模拟温度中加入±2%高斯噪声。利用Canny边缘检测器从计算得到的热图中检测出肿瘤的轮廓,因为计算得到的温度在肿瘤的轮廓上有较大的梯度。将该方法与基于Chan-Vese的水平集分割方法进行比较,该方法应用于T1增强和Flair MRI含肿瘤脑图像。考虑到不同的肿瘤体积和位置,在4个不同的幻影患者和50个BRATS 2012和BRATS 2013合成患者中测试了该方法。与水平集分割法相比,该方法对所有患者的分割结果均有显著改善,平均仅用热图像分割出0.8%的肿瘤区域和2.48%的健康组织。我们得出结论,基于肿瘤温度变化的肿瘤轮廓描绘可以用来加强和增强MRI诊断中的分割算法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
12.00
自引率
0.00%
发文量
11
审稿时长
20 weeks
期刊介绍: The International Journal of Biomedical Imaging is managed by a board of editors comprising internationally renowned active researchers. The journal is freely accessible online and also offered for purchase in print format. It employs a web-based review system to ensure swift turnaround times while maintaining high standards. In addition to regular issues, special issues are organized by guest editors. The subject areas covered include (but are not limited to): Digital radiography and tomosynthesis X-ray computed tomography (CT) Magnetic resonance imaging (MRI) Single photon emission computed tomography (SPECT) Positron emission tomography (PET) Ultrasound imaging Diffuse optical tomography, coherence, fluorescence, bioluminescence tomography, impedance tomography Neutron imaging for biomedical applications Magnetic and optical spectroscopy, and optical biopsy Optical, electron, scanning tunneling/atomic force microscopy Small animal imaging Functional, cellular, and molecular imaging Imaging assays for screening and molecular analysis Microarray image analysis and bioinformatics Emerging biomedical imaging techniques Imaging modality fusion Biomedical imaging instrumentation Biomedical image processing, pattern recognition, and analysis Biomedical image visualization, compression, transmission, and storage Imaging and modeling related to systems biology and systems biomedicine Applied mathematics, applied physics, and chemistry related to biomedical imaging Grid-enabling technology for biomedical imaging and informatics
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