[Serum Proteomic Analysis and Construction of Protein-protein Interaction Networks about Ejaculation Praecox with Shen-yang Deficiency].

中国中西医结合杂志 Pub Date : 2017-04-01
Cong-E Tan, Xiang-Yun Huang, Mi-Qu Wang
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Abstract

Objective To identify serum proteome of ejaculation praecox(EP) with Shen-yang de- ficiency, and to explore its pathogenesis of EP in the protein-protein interaction ( PPI) network. Methods The serum samples were respectively collected from 4 EP with Shen-yang deficiency patients and 4 healthy controls. After the serum proteome of EP with Shen-yang deficiency was obtained, the technology of isobaric tags for relative and absolute quantitation (iTRAQ) was adopted for identification. The STRING data- base was applied to construct the PPI network whose function was analyzed through bioinformatics meth- ods. Results A group of 238 serum proteins were identified in total, of which, 162 proteins reached the strict quantitative standard. Nine proteins were differently expressed, including 1 up-regulated and 8 down-regulated. The constructed PPI network was constituted by 72 protein nodes and 283 protein couples, and could be clustered to 16 clusters, in which 10 clusters were composed of 3 or more proteins. Each cluster could be found with a core protein correspondingly. The core protein of C3,C5,C1S and MASP2 were all main constituents of complement system, whose function involves in biological process of complement ac- tivation. Conclusions The protein models in PPI network of differently expressed serum proteome about EP with Shen-yang deficiency were functional enriched in the biological process of complement activa-, tion; which indicate that a immune dysfuction dominated by abnormal process of complent activation may' be one of the main mechanisms of EP with Shen-yang deficiency.

阳虚早泄患者血清蛋白质组学分析及蛋白相互作用网络的构建[j]。
目的鉴定阳虚早泄(EP)患者血清蛋白质组,探讨EP在蛋白-蛋白相互作用(PPI)网络中的发病机制。方法分别采集4例EP阳虚患者和4例健康对照者的血清。获得阳虚EP血清蛋白质组后,采用等压标签相对绝对定量(iTRAQ)技术进行鉴定。应用STRING数据库构建PPI网络,并利用生物信息学方法对其功能进行分析。结果共鉴定出238种血清蛋白,其中162种达到严格的定量标准。9个蛋白不同表达,其中上调1个,下调8个。构建的PPI网络由72个蛋白质节点和283对蛋白质对组成,可聚为16个簇,其中10个簇由3个或3个以上蛋白质组成。每个簇对应一个核心蛋白。C3、C5、C1S和MASP2等核心蛋白都是补体系统的主要组成部分,其功能涉及补体活化的生物学过程。结论阳虚EP不同表达血清蛋白质组的PPI网络蛋白模型在补体激活生物学过程中功能富集;提示以补体活化异常过程为主的免疫功能障碍可能是阳虚EP的主要机制之一。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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