Discovery of Novel Hemocyanin-Like Genes in Metazoans.

The Biological bulletin Pub Date : 2018-12-01 Epub Date: 2018-11-05 DOI:10.1086/700181
Elisa M Costa-Paiva, Carlos G Schrago, Christopher J Coates, Kenneth M Halanych
{"title":"Discovery of Novel Hemocyanin-Like Genes in Metazoans.","authors":"Elisa M Costa-Paiva,&nbsp;Carlos G Schrago,&nbsp;Christopher J Coates,&nbsp;Kenneth M Halanych","doi":"10.1086/700181","DOIUrl":null,"url":null,"abstract":"<p><p>Among animals, two major groups of oxygen-binding proteins are found: proteins that use iron to bind oxygen (hemoglobins and hemerythrins) and two non-homologous hemocyanins that use copper. Although arthropod and mollusc hemocyanins bind oxygen in the same manner, they are distinct in their molecular structures. In order to better understand the range of natural variation in hemocyanins, we searched for them in a diverse array of metazoan transcriptomes by using bioinformatics tools to examine hemocyanin evolutionary history and to consequently revive the discussion about whether all metazoan hemocyanins shared a common origin with frequent losses or whether they originated separately after the divergence of Lophotrochozoa and Ecdysozoa. We confirm that the distribution of hemocyanin-like genes is more widespread than previously reported, including five putative novel mollusc hemocyanin genes in two annelid species from Chaetopteridae. For arthropod hemocyanins, 16 putative novel genes were retained, and the presence of arthropod hemocyanins in 11 annelid species represents a novel observation. Interestingly, Annelida is the lineage that presents the greatest repertoire of oxygen transport proteins reported to date, possessing all the main superfamily proteins, which could be explained partially by the immense variability of lifestyles and habitats. Work presented here contradicts the canonical view that hemocyanins are restricted to molluscs and arthropods, suggesting that the occurrence of copper-based blood pigments in metazoans has been underestimated. Our results also support the idea of the presence of oxygen carrier hemocyanins being widespread across metazoans with an evolutionary history characterized by frequent losses.</p>","PeriodicalId":153307,"journal":{"name":"The Biological bulletin","volume":" ","pages":"134-151"},"PeriodicalIF":0.0000,"publicationDate":"2018-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1086/700181","citationCount":"17","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"The Biological bulletin","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1086/700181","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2018/11/5 0:00:00","PubModel":"Epub","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 17

Abstract

Among animals, two major groups of oxygen-binding proteins are found: proteins that use iron to bind oxygen (hemoglobins and hemerythrins) and two non-homologous hemocyanins that use copper. Although arthropod and mollusc hemocyanins bind oxygen in the same manner, they are distinct in their molecular structures. In order to better understand the range of natural variation in hemocyanins, we searched for them in a diverse array of metazoan transcriptomes by using bioinformatics tools to examine hemocyanin evolutionary history and to consequently revive the discussion about whether all metazoan hemocyanins shared a common origin with frequent losses or whether they originated separately after the divergence of Lophotrochozoa and Ecdysozoa. We confirm that the distribution of hemocyanin-like genes is more widespread than previously reported, including five putative novel mollusc hemocyanin genes in two annelid species from Chaetopteridae. For arthropod hemocyanins, 16 putative novel genes were retained, and the presence of arthropod hemocyanins in 11 annelid species represents a novel observation. Interestingly, Annelida is the lineage that presents the greatest repertoire of oxygen transport proteins reported to date, possessing all the main superfamily proteins, which could be explained partially by the immense variability of lifestyles and habitats. Work presented here contradicts the canonical view that hemocyanins are restricted to molluscs and arthropods, suggesting that the occurrence of copper-based blood pigments in metazoans has been underestimated. Our results also support the idea of the presence of oxygen carrier hemocyanins being widespread across metazoans with an evolutionary history characterized by frequent losses.

在后生动物中发现新的血青素样基因。
在动物中,发现了两大类氧结合蛋白:一类是利用铁结合氧的蛋白质(血红蛋白和血红蛋白),另一类是利用铜的两种非同源的血青蛋白。虽然节肢动物和软体动物的血青素结合氧的方式相同,但它们的分子结构不同。为了更好地了解血青素的自然变异范围,我们使用生物信息学工具在多种后生动物转录组中寻找血青素,以检查血青素的进化史,从而重新讨论所有后生动物的血青素是否有一个共同的起源,并且经常丢失,或者它们是否在光藻和外生动物分化后分别起源。我们证实,血红素样基因的分布比以前报道的更广泛,包括五个推测新的软体动物血红素基因,来自毛翼动物的两个环节动物物种。对于节肢动物的血青素,保留了16个假定的新基因,并且在11种环节动物中存在节肢动物的血青素代表了一种新的观察。有趣的是,环节动物是迄今为止报道的拥有最多氧转运蛋白的谱系,拥有所有主要的超家族蛋白,这可以部分解释为生活方式和栖息地的巨大差异。这里提出的工作反驳了血青素仅限于软体动物和节肢动物的权威观点,表明铜基血液色素在后生动物中的存在被低估了。我们的研究结果也支持氧载体血青素的存在在具有频繁损失的进化史的后生动物中广泛存在的观点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信