Human Nail Clippings as a Source of DNA for Genetic Studies.

Le Truong, Hannah Lui Park, Seong Sil Chang, Argyrios Ziogas, Susan L Neuhausen, Sophia S Wang, Leslie Bernstein, Hoda Anton-Culver
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引用次数: 8

Abstract

Blood samples have traditionally been used as the main source of DNA for genetic analysis. However, this source can be difficult in terms of collection, transportation, and long-term storage. In this study, we investigated whether human nail clippings could be used as a source of DNA for SNP genotyping, null-allele detection, and whole-genome amplification. From extracted nail DNA, we achieved amplicons up to a length of ~400 bp and >96% concordance for SNP genotyping and 100% concordance for null-allele detection compared to DNA derived from matched blood samples. For whole-genome amplification, OmniPlex performed better than Multiple Displacement Amplification with a success rate of 89.3% and 76.8% for SNP genotyping and null-allele detection, respectively. Concordance was ~98% for both methods. When combined with OmniPlex whole-genome amplification, human nail clippings could potentially be used as an alternative to whole blood as a less invasive and more convenient source of DNA for genotyping studies.

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人类剪指甲作为基因研究的DNA来源。
传统上,血液样本被用作基因分析DNA的主要来源。然而,这种来源在收集、运输和长期储存方面可能很困难。在这项研究中,我们研究了人类指甲修剪是否可以作为SNP基因分型、零等位基因检测和全基因组扩增的DNA来源。从提取的指甲DNA中,我们获得了长达400 bp的扩增子,与来自匹配血液样本的DNA相比,SNP基因分型的一致性>96%,零等位基因检测的一致性> 100%。在全基因组扩增中,OmniPlex的SNP基因分型和零等位基因检测成功率分别为89.3%和76.8%,优于Multiple Displacement amplification。两种方法的符合率均为98%。当与OmniPlex全基因组扩增相结合时,人类指甲修剪可能被用作全血的替代品,作为一种侵入性更小、更方便的基因分型研究DNA来源。
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