[The use of real-time RT-PCR method for the determination of Toll-like genes expression at mRNA level].

Agnieszka Cześcik, Agnieszka Trzcińska, Milena Dunal-Szczepaniak, Joanna Siennicka
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Abstract

Introduction: Toll-like receptors (TLRs) are an important component of a innate immune system. Stimulation of TLRs, through action with helper T cells, could change Th1/Th2 balance and thus affect adaptive immune response. The aim of this work was to optimize the stimulation of the peripheral blood mononuclear cells (PBMC) and the validation of real-time RT-PCR method for determination of Toll-like gene expression in these cells.

Methods: PBMCs from healthy donors were stimulated with measles viruses and ligands for TLR2 and TLR4. For examinations the real time RT-PCR (QuantiFast Assay, Qiagen) was used. Fold change of TLRs expression was normalized to GAPDH and estimated by 2(-deltadeltaCt) method. Validation of real-time RT-PCR method was performed for repeatability and efficiency.

Results: The level of gene expression varies between individuals and was dose and time of incubation dependent. The efficiency ofreal-time RT-PCR was 90.4% +/- 10.2 for GAPDH, 87.0% +/- 8.2 for TLR2 and 44.5% +/- 9.2 for TLR4. Repeatability, expressed as relative standard deviation (RSD) for Ct values was less than 0.70% for GAPDH, < 3.2% for TLR2 and < 2.84% for TLR4.

Conclusions: Based on obtained results, the optimal conditions for stimulation were: 10 microg/ml/24h for LPS, 1 microg/ml/6h for Pam3CSK4 and 1250 MeV infectious particles/24h.

[采用实时RT-PCR法测定toll样基因mRNA水平的表达]。
toll样受体(TLRs)是先天免疫系统的重要组成部分。刺激TLRs通过与辅助性T细胞作用,改变Th1/Th2平衡,从而影响适应性免疫反应。这项工作的目的是优化外周血单核细胞(PBMC)的刺激,并验证实时RT-PCR方法测定这些细胞中toll样基因表达。方法:用麻疹病毒和TLR2、TLR4配体刺激健康供体PBMCs。检测采用实时RT-PCR (QuantiFast Assay, Qiagen)。TLRs表达的倍数变化归一化为GAPDH,用2(-deltadeltaCt)法估计。验证实时RT-PCR方法的重复性和效率。结果:基因表达水平在个体间存在差异,并与孵育剂量和孵育时间有关。实时RT-PCR检测GAPDH的效率为90.4% +/- 10.2,TLR2的效率为87.0% +/- 8.2,TLR4的效率为44.5% +/- 9.2。重复性,用相对标准偏差(RSD)表示,GAPDH的Ct值小于0.70%,TLR2 < 3.2%, TLR4 < 2.84%。结论:LPS的最佳刺激条件为10 μ g/ml/24h, Pam3CSK4的最佳刺激条件为1 μ g/ml/6h,感染颗粒1250 MeV /24h。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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