Plasmid diversity in arctic strains of Psychrobacter spp.

Lukasz Dziewit, Adrian Cegielski, Krzysztof Romaniuk, Witold Uhrynowski, Antoni Szych, Pawel Niesiobedzki, Magdalena J Zmuda-Baranowska, Marek K Zdanowski, Dariusz Bartosik
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引用次数: 27

Abstract

Six strains of Psychrobacter spp. isolated from guano of little auks collected on Spitsbergen island (Arctic) carried nine plasmids that were fully sequenced. These replicons (ranging in size from 2917 to 14924 bp) contained either repA (ColE2-type) or repB (iteron-type) replication systems of a relatively narrow host range, limited to Psychrobacter spp. All but one of the plasmids carried predicted mobilization for conjugal transfer systems, encoding relaxases of the MOBQ, MOBV or MOBP families. The plasmids also contained diverse additional genetic load, including a type II restriction-modification system and a gene encoding a putative subunit C of alkyl hydroperoxide reductase (AhpC)-an antioxidant enzyme and major scavenger of reactive oxygen species. Detailed comparative sequence analyses, extended to all plasmids identified so far in psychrophilic bacteria, distinguished groups of the most ubiquitous replicons, which play a key role in horizontal gene transfer in cold environments.

Abstract Image

Abstract Image

Abstract Image

冻干杆菌属北极菌株的质粒多样性。
从北极斯匹次卑尔根岛收集的小海雀鸟粪中分离到的6株冻干杆菌携带9个质粒,并对其进行了全序列测定。这些复制子(大小从2917到14924 bp不等)包含repA (cole2型)或repB (iteron型)复制系统,其宿主范围相对较窄,仅限于Psychrobacter spp。除了一个质粒外,所有质粒都携带预测的共轭转移系统动员,编码MOBQ, MOBV或MOBP家族的松弛。质粒还含有多种额外的遗传负荷,包括II型限制性修饰系统和一个编码烷基氢过氧化物还原酶(AhpC)的推定亚基C的基因,AhpC是一种抗氧化酶和活性氧的主要清除剂。详细的比较序列分析扩展到迄今为止在嗜冷细菌中发现的所有质粒,区分了最普遍存在的复制子群,这些复制子在寒冷环境中水平基因转移中起着关键作用。
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