Biogeochemistry of dihydrogen (H2).

Tori M Hoehler
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At the same time, the reactive atmospheric sink for H2 was likely weaker. Collectively, these factors suggest that steady state levels of H2 in the prebiotic atmosphere were 3-4 orders of magnitude higher than at present, and possibly higher still during transient periods following the delivery of Fe and Ni by large impact events. These elevated levels had direct or indirect impacts on the redox state of the atmosphere, the radiation budget, the production of aerosol hazes, and the genesis of biochemical precursor compounds. The early abiotic cycling of H2 helped to establish the environmental and chemical context for the origins of life on Earth. The potential for H2 to serve as a source of energy and reducing power, and to afford a means of energy storage by the establishment of proton gradients, could have afforded it a highly utilitarian role in the earliest metabolic chemistry. Some origin of life theories suggest the involvement of H2 in the first energy-generating metabolism, and the widespread and deeply-branching nature of H2-utilization in the modern tree of life suggests that it was at least a very early biochemical innovation. The abiotic production of H2 via several mechanisms of water-rock interaction could have supported an early chemosynthetic biosphere. Such processes offer the continued potential for a deep, rock-hosted biosphere on Earth or other bodies in the solar system. The continued evolution of metabolic and community-level versatility among microbes led to an expanded ability to completely exploit the energy available in complex organic matter. Under the anoxic conditions that prevailed on the early Earth, this was accomplished through the linked and sequential action of several metabolic classes of organisms. By transporting electrons between cells, H2 provides a means of linking the activities of these organisms into a highly functional and interactive network. At the same time, H2 concentrations exert a powerful thermodynamic control on many aspects of metabolism and biogeochemical function in these systems. Anaerobic communities based on the consumption of organic matter continue to play an important role in global biogeochemistry even into the present day. As the principal arbiters of chemistry in most aquatic sediments and animal digestive systems, these microbes affect the redox and trace-gas chemistry of our oceans and atmosphere, and constitute the ultimate biological filter on material passing into the rock record. It is in such communities that the significance of H2 in mediating biogeochemical function is most strongly expressed. The advent of phototrophic metabolism added another layer of complexity to microbial communities, and to the role of H2 therein. Anoxygenic and oxygenic phototrophs retained and expanded on the utilization of H2 in metabolic processes. Both groups produce and consume H2 through a variety of mechanisms. In the natural world, phototrophic organisms are often closely juxtaposed with a variety of other metabolic types, through the formation of biofilms and microbial mats. In the few examples studied, phototrophs contribute an often swamping term to the H2 economy of these communities, with important implications for their overall function-including regulation of the redox state of gaseous products, and direct release of large quantities of H2 to the environment. As one of the dominant sources of biological productivity for as much as 2 billion years of Earth's history, these communities have been among the most important agents of long-term global biogeochemical change. On the modern Earth, H2 is present at only trace levels in the atmosphere and oceans. Nonetheless, its function as an arbiter of microbial interactions and chemistry ensures an important role in biogeochemical cycling. The significance of H2 in a global sense may soon increase, as the search for alternative fuels casts attention on the clean-energy potential of hydrogen fuel cells. Already, H2 utilization plays an important role in all three phylogenetic domains of life. Humans may soon add an important new term to this economy. Considerable research is focused on the H2-producing capacities of phototrophic and other microorganisms as potential contributors in this regard. Regardless of source, the large scale utilization of H2 as an energy source could carry important consequences for biogeochemistry.</p>","PeriodicalId":54739,"journal":{"name":"Metal Ions in Biological Systems","volume":"43 ","pages":"9-48"},"PeriodicalIF":0.0000,"publicationDate":"2005-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"24","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Metal Ions in Biological Systems","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1201/9780824751999.ch2","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 24

Abstract

Hydrogen has had an important and evolving role in Earth's geo- and biogeochemistry, from prebiotic to modern times. On the earliest Earth, abiotic sources of H2 were likely stronger than in the present. Volcanic out-gassing and hydrothermal circulation probably occurred at several times the modern rate, due to presumably higher heat flux. The H2 component of volcanic emissions was likely buffered close to the modern value by an approximately constant mantle oxidation state since 3.9 billion years ago, and may have been higher before that, if the early mantle was more reducing. The predominantly ultramafic character of the early, undifferentiated crust could have led to increased serpentinization and release of H2 by hydrothermal circulation, as in modern ultramafic-hosted vents. At the same time, the reactive atmospheric sink for H2 was likely weaker. Collectively, these factors suggest that steady state levels of H2 in the prebiotic atmosphere were 3-4 orders of magnitude higher than at present, and possibly higher still during transient periods following the delivery of Fe and Ni by large impact events. These elevated levels had direct or indirect impacts on the redox state of the atmosphere, the radiation budget, the production of aerosol hazes, and the genesis of biochemical precursor compounds. The early abiotic cycling of H2 helped to establish the environmental and chemical context for the origins of life on Earth. The potential for H2 to serve as a source of energy and reducing power, and to afford a means of energy storage by the establishment of proton gradients, could have afforded it a highly utilitarian role in the earliest metabolic chemistry. Some origin of life theories suggest the involvement of H2 in the first energy-generating metabolism, and the widespread and deeply-branching nature of H2-utilization in the modern tree of life suggests that it was at least a very early biochemical innovation. The abiotic production of H2 via several mechanisms of water-rock interaction could have supported an early chemosynthetic biosphere. Such processes offer the continued potential for a deep, rock-hosted biosphere on Earth or other bodies in the solar system. The continued evolution of metabolic and community-level versatility among microbes led to an expanded ability to completely exploit the energy available in complex organic matter. Under the anoxic conditions that prevailed on the early Earth, this was accomplished through the linked and sequential action of several metabolic classes of organisms. By transporting electrons between cells, H2 provides a means of linking the activities of these organisms into a highly functional and interactive network. At the same time, H2 concentrations exert a powerful thermodynamic control on many aspects of metabolism and biogeochemical function in these systems. Anaerobic communities based on the consumption of organic matter continue to play an important role in global biogeochemistry even into the present day. As the principal arbiters of chemistry in most aquatic sediments and animal digestive systems, these microbes affect the redox and trace-gas chemistry of our oceans and atmosphere, and constitute the ultimate biological filter on material passing into the rock record. It is in such communities that the significance of H2 in mediating biogeochemical function is most strongly expressed. The advent of phototrophic metabolism added another layer of complexity to microbial communities, and to the role of H2 therein. Anoxygenic and oxygenic phototrophs retained and expanded on the utilization of H2 in metabolic processes. Both groups produce and consume H2 through a variety of mechanisms. In the natural world, phototrophic organisms are often closely juxtaposed with a variety of other metabolic types, through the formation of biofilms and microbial mats. In the few examples studied, phototrophs contribute an often swamping term to the H2 economy of these communities, with important implications for their overall function-including regulation of the redox state of gaseous products, and direct release of large quantities of H2 to the environment. As one of the dominant sources of biological productivity for as much as 2 billion years of Earth's history, these communities have been among the most important agents of long-term global biogeochemical change. On the modern Earth, H2 is present at only trace levels in the atmosphere and oceans. Nonetheless, its function as an arbiter of microbial interactions and chemistry ensures an important role in biogeochemical cycling. The significance of H2 in a global sense may soon increase, as the search for alternative fuels casts attention on the clean-energy potential of hydrogen fuel cells. Already, H2 utilization plays an important role in all three phylogenetic domains of life. Humans may soon add an important new term to this economy. Considerable research is focused on the H2-producing capacities of phototrophic and other microorganisms as potential contributors in this regard. Regardless of source, the large scale utilization of H2 as an energy source could carry important consequences for biogeochemistry.

二氢(H2)的生物地球化学。
从益生元到现代,氢在地球的地质和生物地球化学中一直扮演着重要的角色。在早期的地球上,氢气的非生物来源可能比现在更强大。火山喷发和热液循环的发生速率可能是现代的几倍,这可能是由于较高的热通量。39亿年前,由于地幔的氧化状态近似恒定,火山排放物中的H2成分可能被缓冲到接近现代的值,如果早期地幔的还原程度更高,那么在此之前,H2成分可能更高。早期未分化地壳的超镁铁质特征可能导致了蛇纹岩化的增加,并通过热液循环释放H2,如现代的超镁铁质喷口。同时,H2的反应性大气汇可能较弱。综上所述,这些因素表明,益生元大气中H2的稳态水平比现在高3-4个数量级,在大型撞击事件传递铁和镍后的短暂时期可能还会更高。这些升高的水平对大气的氧化还原状态、辐射收支、气溶胶雾霾的产生和生化前体化合物的产生有直接或间接的影响。H2的早期非生物循环有助于建立地球上生命起源的环境和化学背景。氢气作为能量来源和降低功率的潜力,以及通过建立质子梯度提供能量储存的手段,可能使它在最早的代谢化学中发挥高度实用的作用。一些生命起源理论认为,H2参与了第一次能量生成代谢,而现代生命树中H2利用的广泛和深入的分支性质表明,它至少是一个非常早期的生化创新。通过水岩相互作用的几种机制产生的非生物H2可能支持了早期的化学合成生物圈。这样的过程提供了在地球或太阳系其他天体上持续存在深层岩石生物圈的可能性。微生物在代谢和群落水平上的多功能性的持续进化导致了完全利用复杂有机物中可用能量的能力的扩大。在地球早期普遍存在的缺氧条件下,这是通过几个代谢类生物的相互联系和顺序的作用来完成的。通过在细胞之间传递电子,H2提供了一种将这些生物体的活动连接到一个高度功能和相互作用的网络中的手段。同时,H2浓度对这些系统的代谢和生物地球化学功能的许多方面施加强大的热力学控制。即使到今天,以消耗有机物为基础的厌氧群落仍在全球生物地球化学中发挥着重要作用。作为大多数水生沉积物和动物消化系统的主要化学仲裁者,这些微生物影响着我们海洋和大气的氧化还原和痕量气体化学,并构成了进入岩石记录的物质的最终生物过滤器。正是在这样的群落中,H2介导生物地球化学功能的意义表现得最为强烈。光营养代谢的出现为微生物群落和H2在其中的作用增加了另一层复杂性。缺氧和富氧光养生物在代谢过程中保留和扩大了对H2的利用。这两组都通过不同的机制产生和消耗H2。在自然界中,通过形成生物膜和微生物席,光养生物经常与各种其他代谢类型紧密并列。在研究的几个例子中,光养生物对这些群落的H2经济做出了巨大贡献,这对它们的整体功能具有重要意义,包括调节气态产物的氧化还原状态,以及直接向环境释放大量H2。作为地球历史上20亿年生物生产力的主要来源之一,这些群落一直是长期全球生物地球化学变化的最重要因素之一。在现代地球上,大气和海洋中只有微量的氢。尽管如此,它作为微生物相互作用和化学的仲裁者的功能确保了它在生物地球化学循环中的重要作用。随着对替代燃料的研究将人们的注意力投向氢燃料电池的清洁能源潜力,氢在全球意义上的重要性可能很快会增加。H2利用已经在生命的所有三个系统发育领域发挥了重要作用。人类可能很快就会给这种经济增添一个重要的新术语。 相当多的研究集中在光养微生物和其他微生物作为这方面的潜在贡献者的生产h2的能力上。无论来源如何,大规模利用氢气作为能源可能对生物地球化学产生重要影响。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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