In vitro and in silico analysis of signal peptides from the human blood fluke, Schistosoma mansoni

Mark S. Pearson , Donald P. McManus , Danielle J. Smyth , Fred A. Lewis , Alex Loukas
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引用次数: 20

Abstract

Proteins secreted by and anchored on the surfaces of parasites are in intimate contact with host tissues. The transcriptome of infective cercariae of the blood fluke, Schistosoma mansoni, was screened using signal sequence trap to isolate cDNAs encoding predicted proteins with an N-terminal signal peptide. Twenty cDNA fragments were identified, most of which contained predicted signal peptides or transmembrane regions, including a novel putative seven-transmembrane receptor and a membrane-associated mitogen-activated protein kinase. The developmental expression pattern within different life-cycle stages ranged from ubiquitous to a transcript that was highly upregulated in the cercaria. A bioinformatics-based comparison of 100 signal peptides from each of schistosomes, humans, a parasitic nematode and Escherichia coli showed that differences in the sequence composition of signal peptides, notably the residues flanking the predicted cleavage site, might account for the negative bias exhibited in the processing of schistosome signal peptides in mammalian cells.

人血吸虫曼氏血吸虫信号肽的体外和计算机分析
由寄生虫分泌并固定在其表面的蛋白质与宿主组织密切接触。采用信号序列诱捕法,对曼氏血吸虫感染尾蚴的转录组进行了筛选,分离出编码n端信号肽预测蛋白的cdna。共鉴定了20个cDNA片段,其中大部分含有预测的信号肽或跨膜区域,包括一个新的假定的七跨膜受体和一个膜相关的有丝分裂原激活蛋白激酶。在不同生命周期阶段的发育表达模式从普遍存在到在尾蚴中高度上调的转录物不等。对来自血吸虫、人类、寄生线虫和大肠杆菌的100个信号肽进行生物信息学比较,结果表明,信号肽序列组成的差异,特别是预测切割位点两侧的残基,可能解释了哺乳动物细胞中血吸虫信号肽加工中表现出的负偏倚。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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