Non-destructive estimation of individual buckwheat plant biomass using high-throughput phenotyping-derived canopy traits.

IF 5.9 2区 生物学 Q1 PLANT SCIENCES
Frontiers in Plant Science Pub Date : 2026-10-08 eCollection Date: 2026-01-01 DOI:10.3389/fpls.2026.1953140
Stephen Njehia Njane, Takashi Hara, Kumpei Ota, Hiroshi Nakagawa
{"title":"Non-destructive estimation of individual buckwheat plant biomass using high-throughput phenotyping-derived canopy traits.","authors":"Stephen Njehia Njane, Takashi Hara, Kumpei Ota, Hiroshi Nakagawa","doi":"10.3389/fpls.2026.1953140","DOIUrl":null,"url":null,"abstract":"<p><p>In this research, we aim to develop a technique for estimating biomass of individual buckwheat from high-throughput phenotyping derived crop traits (HTP-derived crop traits). A tractor-mounted multi-camera phenotyping system was utilised to take images which were processed to generate crop height, volume index and coverage. The accuracy of the imaging system was first validated by comparing image-derived plant height with manual measurements, showing strong agreement with high linear coefficients of determination (R<sup>2</sup>) of 0.95 and 0.93 for \"18sd-1\" and \"Kitamitsuki\", respectively. A biomass estimation model was then developed by relating biomass accumulation to estimated HTP-derived crop traits and compared to that of Monteith-based RUE framework. Biomass estimation was evaluated using one-stage, two-stage, and three-stage models, where the two-stage model separated pre- and post-flowering periods and the three-stage model further divided the pre-flowering period into early and mid-growth stages. The three-stage model improved performance, indicating that developmental stage should be considered when modelling biomass accumulation in buckwheat. Among the evaluated HTP-derived traits, volume index showed the strongest association with measured biomass and showed a similar accuracy as that of the conventional coverage-based RUE framework. These results demonstrate that HTP-derived structural traits, particularly volume index, provide a practical and biologically interpretable approach for repeated, non-destructive estimation of individual-plant biomass in buckwheat.</p>","PeriodicalId":12632,"journal":{"name":"Frontiers in Plant Science","volume":"17 ","pages":"1953140"},"PeriodicalIF":5.9000,"publicationDate":"2026-10-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13687041/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Frontiers in Plant Science","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.3389/fpls.2026.1953140","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2026/1/1 0:00:00","PubModel":"eCollection","JCR":"Q1","JCRName":"PLANT SCIENCES","Score":null,"Total":0}
引用次数: 0

Abstract

In this research, we aim to develop a technique for estimating biomass of individual buckwheat from high-throughput phenotyping derived crop traits (HTP-derived crop traits). A tractor-mounted multi-camera phenotyping system was utilised to take images which were processed to generate crop height, volume index and coverage. The accuracy of the imaging system was first validated by comparing image-derived plant height with manual measurements, showing strong agreement with high linear coefficients of determination (R2) of 0.95 and 0.93 for "18sd-1" and "Kitamitsuki", respectively. A biomass estimation model was then developed by relating biomass accumulation to estimated HTP-derived crop traits and compared to that of Monteith-based RUE framework. Biomass estimation was evaluated using one-stage, two-stage, and three-stage models, where the two-stage model separated pre- and post-flowering periods and the three-stage model further divided the pre-flowering period into early and mid-growth stages. The three-stage model improved performance, indicating that developmental stage should be considered when modelling biomass accumulation in buckwheat. Among the evaluated HTP-derived traits, volume index showed the strongest association with measured biomass and showed a similar accuracy as that of the conventional coverage-based RUE framework. These results demonstrate that HTP-derived structural traits, particularly volume index, provide a practical and biologically interpretable approach for repeated, non-destructive estimation of individual-plant biomass in buckwheat.

利用高通量表型衍生的冠层性状对荞麦单株生物量进行无损估计。
在本研究中,我们旨在开发一种利用高通量表型衍生作物性状(htp衍生作物性状)估算荞麦单株生物量的技术。利用拖拉机安装的多摄像头表型系统拍摄图像,处理后生成作物高度、体积指数和覆盖度。首先,通过将图像提取的植物高度与人工测量结果进行比较,验证了成像系统的准确性,结果显示“18sd-1”和“Kitamitsuki”的线性决定系数(R2)分别为0.95和0.93。然后,通过将生物量积累与估算的htp衍生作物性状相关联,建立了生物量估算模型,并与基于monteith的RUE框架进行了比较。生物量估算采用一阶段模型、两阶段模型和三阶段模型进行,其中两阶段模型将花前期和花后期分开,三阶段模型将花前期进一步划分为生长早期和中期。三阶段模型提高了性能,表明在模拟荞麦生物量积累时应考虑发育阶段。在评估的htp衍生性状中,体积指数与测量生物量的相关性最强,并且显示出与传统的基于覆盖度的RUE框架相似的准确性。这些结果表明,htp衍生的结构特征,特别是体积指数,为荞麦单株生物量的重复、非破坏性估计提供了一种实用的、生物学上可解释的方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Frontiers in Plant Science
Frontiers in Plant Science PLANT SCIENCES-
CiteScore
7.30
自引率
14.30%
发文量
4844
审稿时长
14 weeks
期刊介绍: In an ever changing world, plant science is of the utmost importance for securing the future well-being of humankind. Plants provide oxygen, food, feed, fibers, and building materials. In addition, they are a diverse source of industrial and pharmaceutical chemicals. Plants are centrally important to the health of ecosystems, and their understanding is critical for learning how to manage and maintain a sustainable biosphere. Plant science is extremely interdisciplinary, reaching from agricultural science to paleobotany, and molecular physiology to ecology. It uses the latest developments in computer science, optics, molecular biology and genomics to address challenges in model systems, agricultural crops, and ecosystems. Plant science research inquires into the form, function, development, diversity, reproduction, evolution and uses of both higher and lower plants and their interactions with other organisms throughout the biosphere. Frontiers in Plant Science welcomes outstanding contributions in any field of plant science from basic to applied research, from organismal to molecular studies, from single plant analysis to studies of populations and whole ecosystems, and from molecular to biophysical to computational approaches. Frontiers in Plant Science publishes articles on the most outstanding discoveries across a wide research spectrum of Plant Science. The mission of Frontiers in Plant Science is to bring all relevant Plant Science areas together on a single platform.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信
小红书