{"title":"The diverse effects of side reactions on the persistence of autocatalytic cycles.","authors":"Zhen Peng, Emily Spencer, David Baum","doi":"10.1098/rsif.2026.0308","DOIUrl":null,"url":null,"abstract":"<p><p>A key criticism of metabolism-first theories of abiogenesis is that, in the absence of specialized catalysts, side reactions would convert too many autocatalysts to inert by-products for autocatalytic systems to persist. Here, we use algebraic analysis and numerical simulations to explore the effects of side reactions on the persistence of simple autocatalytic systems. For an autocatalytic reaction coupled to a side reaction, whenever a component reaction is strictly irreversible, which is technically impossible but frequently considered an acceptable approximation, side reactions harm autocatalytic systems. But if all reactions are assumed reversible, perhaps with unequal forward and reverse rate constants, side reactions can have a wide range of effects-they can be harmful, neutral, beneficial, or harmful in the short term but beneficial in the longer term. These effects arise in the presence of reversible reactions, because side products can also serve as a reservoir from which autocatalysts can be re-derived. We then use algebraic analysis to confirm that such diverse effects also apply to a larger autocatalytic cycle coupled to more side reactions. Our results show that the effects of side reactions on autocatalytic systems do not provide sufficient grounds to reject metabolism-first models.</p>","PeriodicalId":17488,"journal":{"name":"Journal of The Royal Society Interface","volume":"23 243","pages":""},"PeriodicalIF":3.4000,"publicationDate":"2026-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of The Royal Society Interface","FirstCategoryId":"103","ListUrlMain":"https://doi.org/10.1098/rsif.2026.0308","RegionNum":2,"RegionCategory":"综合性期刊","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"MULTIDISCIPLINARY SCIENCES","Score":null,"Total":0}
引用次数: 0
Abstract
A key criticism of metabolism-first theories of abiogenesis is that, in the absence of specialized catalysts, side reactions would convert too many autocatalysts to inert by-products for autocatalytic systems to persist. Here, we use algebraic analysis and numerical simulations to explore the effects of side reactions on the persistence of simple autocatalytic systems. For an autocatalytic reaction coupled to a side reaction, whenever a component reaction is strictly irreversible, which is technically impossible but frequently considered an acceptable approximation, side reactions harm autocatalytic systems. But if all reactions are assumed reversible, perhaps with unequal forward and reverse rate constants, side reactions can have a wide range of effects-they can be harmful, neutral, beneficial, or harmful in the short term but beneficial in the longer term. These effects arise in the presence of reversible reactions, because side products can also serve as a reservoir from which autocatalysts can be re-derived. We then use algebraic analysis to confirm that such diverse effects also apply to a larger autocatalytic cycle coupled to more side reactions. Our results show that the effects of side reactions on autocatalytic systems do not provide sufficient grounds to reject metabolism-first models.
期刊介绍:
J. R. Soc. Interface welcomes articles of high quality research at the interface of the physical and life sciences. It provides a high-quality forum to publish rapidly and interact across this boundary in two main ways: J. R. Soc. Interface publishes research applying chemistry, engineering, materials science, mathematics and physics to the biological and medical sciences; it also highlights discoveries in the life sciences of relevance to the physical sciences. Both sides of the interface are considered equally and it is one of the only journals to cover this exciting new territory. J. R. Soc. Interface welcomes contributions on a diverse range of topics, including but not limited to; biocomplexity, bioengineering, bioinformatics, biomaterials, biomechanics, bionanoscience, biophysics, chemical biology, computer science (as applied to the life sciences), medical physics, synthetic biology, systems biology, theoretical biology and tissue engineering.