Carlota Arias-Hidalgo, Juan Hernández-Vazquez, Cristina Teodosio, Pablo Juanes-Velasco, Ana Nuño-Soriano, Paloma Cal-Sabater, Elisa Arribas-Rodríguez, Aida Fiz-López, Marina Pérez-Mazzali, Álvaro Martín-Muñoz, Pablo Tellería, Marina G. De Vicuña, Javier Gamazo-Herrero, Ignacio de la Fuente-Graciani, Sonia Pérez-González, Sara Bravo, Cristina García-Alonso, Carlos Dueñas, María Jesús Peñarrubia, Manuel Vigo-Aceves, Claudia Núñez-Abascal, Lucía Neira-González, Rafael Gongora, Sara Cuesta-Sancho, David Bernardo, Ángela-Patricia Hernández, Manuel Fuentes
{"title":"Integrated Immune Profiling Identifies Treatment-Associated Immune Patterns in Patients with B-Cell Hematological Malignancies","authors":"Carlota Arias-Hidalgo, Juan Hernández-Vazquez, Cristina Teodosio, Pablo Juanes-Velasco, Ana Nuño-Soriano, Paloma Cal-Sabater, Elisa Arribas-Rodríguez, Aida Fiz-López, Marina Pérez-Mazzali, Álvaro Martín-Muñoz, Pablo Tellería, Marina G. De Vicuña, Javier Gamazo-Herrero, Ignacio de la Fuente-Graciani, Sonia Pérez-González, Sara Bravo, Cristina García-Alonso, Carlos Dueñas, María Jesús Peñarrubia, Manuel Vigo-Aceves, Claudia Núñez-Abascal, Lucía Neira-González, Rafael Gongora, Sara Cuesta-Sancho, David Bernardo, Ángela-Patricia Hernández, Manuel Fuentes","doi":"10.1021/acs.jproteome.6c00394","DOIUrl":null,"url":null,"abstract":"<p>Immune dysfunction in hematological malignancies arises\r\nfrom both\r\ndisease-related alterations and therapeutic interventions, yet comprehensive\r\napproaches for characterizing the immune status remain limited. We\r\nevaluated an integrated immune profiling strategy combining antigen-specific\r\nserology and high-dimensional B-cell phenotyping. Thirty-eight patients\r\nwith B-cell hematological malignancies receiving ibrutinib-, lenalidomide-,\r\nand rituximab-based therapies, or no treatment, were analyzed. Antigen-specific\r\nhumoral responses were assessed by using a customized protein microarray\r\ncontaining 37 microbial antigens, enabling parallel IgG and IgM profiling.\r\nB-cell subpopulations were characterized by spectral flow cytometry.\r\nMultiomics factor analysis was applied to integrate serological and\r\ncellular data sets and identify major sources of immune variability.\r\nDistinct serological and cellular immune profiles were observed across\r\ntherapeutic groups. Patients receiving ibrutinib displayed lower IgG\r\nlevels against several microbial antigens and alterations in multiple\r\nB-cell compartments, whereas patients receiving lenalidomide-based\r\ntherapy showed comparatively preserved B-cell populations and broader\r\nantigen-specific IgG reactivity. Rituximab-containing regimens were\r\nassociated with marked reductions in several B-cell subsets. Integrated\r\nanalysis identified cellular immune features as the major contributors\r\nto interpatient heterogeneity, which suggests the presence of treatment-associated\r\nimmune patterns within the studied cohort. Therefore, integrated serological\r\nand cellular profiling provides a scalable framework for characterizing\r\nan immune fingerprint with potential prognostic value in patients\r\nwith B-cell hematological malignancies. These findings support further\r\ninvestigation of immune monitoring approaches in larger longitudinal\r\ncohorts.</p>","PeriodicalId":48,"journal":{"name":"Journal of Proteome Research","volume":"25 10","pages":"5404–5417"},"PeriodicalIF":3.8000,"publicationDate":"2026-10-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Proteome Research","FirstCategoryId":"99","ListUrlMain":"https://pubs.acs.org/doi/10.1021/acs.jproteome.6c00394","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2026/9/3 0:00:00","PubModel":"Epub","JCR":"Q1","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
引用次数: 0
Abstract
Immune dysfunction in hematological malignancies arises
from both
disease-related alterations and therapeutic interventions, yet comprehensive
approaches for characterizing the immune status remain limited. We
evaluated an integrated immune profiling strategy combining antigen-specific
serology and high-dimensional B-cell phenotyping. Thirty-eight patients
with B-cell hematological malignancies receiving ibrutinib-, lenalidomide-,
and rituximab-based therapies, or no treatment, were analyzed. Antigen-specific
humoral responses were assessed by using a customized protein microarray
containing 37 microbial antigens, enabling parallel IgG and IgM profiling.
B-cell subpopulations were characterized by spectral flow cytometry.
Multiomics factor analysis was applied to integrate serological and
cellular data sets and identify major sources of immune variability.
Distinct serological and cellular immune profiles were observed across
therapeutic groups. Patients receiving ibrutinib displayed lower IgG
levels against several microbial antigens and alterations in multiple
B-cell compartments, whereas patients receiving lenalidomide-based
therapy showed comparatively preserved B-cell populations and broader
antigen-specific IgG reactivity. Rituximab-containing regimens were
associated with marked reductions in several B-cell subsets. Integrated
analysis identified cellular immune features as the major contributors
to interpatient heterogeneity, which suggests the presence of treatment-associated
immune patterns within the studied cohort. Therefore, integrated serological
and cellular profiling provides a scalable framework for characterizing
an immune fingerprint with potential prognostic value in patients
with B-cell hematological malignancies. These findings support further
investigation of immune monitoring approaches in larger longitudinal
cohorts.
期刊介绍:
Journal of Proteome Research publishes content encompassing all aspects of global protein analysis and function, including the dynamic aspects of genomics, spatio-temporal proteomics, metabonomics and metabolomics, clinical and agricultural proteomics, as well as advances in methodology including bioinformatics. The theme and emphasis is on a multidisciplinary approach to the life sciences through the synergy between the different types of "omics".