Repurposing ritonavir to induce proteasomal degradation of IE1 for inhibition of human cytomegalovirus replication.

IF 3.6 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Wanfeng Liu, Yu Shi, Xudong Guo, Chenyu Lou, Zhangyi Xie, Yitian Shen, Liang Zhang, Sunzhong Mao, Xiangyang Xue, Shiyu Feng
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Abstract

Human cytomegalovirus (HCMV) is a major pathogen affecting immunocompromised individuals. Current antiviral drugs target the mid-to-late stages of viral replication but are limited by toxicity and drug resistance. The IE1 protein serves as a key early regulator of HCMV replication; however, it has long been considered undruggable due to the lack of conventional drug-binding sites. In this study, by integrating molecular docking-based virtual screening with in-vitro surface plasmon resonance (SPR) validation, we discovered for the first time that the HIV protease inhibitor ritonavir may bind to the IE1 protein. Further experiments demonstrated that ritonavir significantly reduces IE1 protein levels in a time- and dose-dependent manner without affecting its mRNA expression. Mechanistic investigations revealed that ritonavir promotes selective degradation of IE1 through activation of the ubiquitin-proteasome pathway. Functional assays confirmed that ritonavir effectively inhibits HCMV replication, markedly reducing viral DNA loads and the production of infectious viral particles. Notably, ritonavir exhibited synergistic antiviral effects when combined with the first-line drug ganciclovir (GCV). In summary, this study successfully repurposes the approved drug ritonavir as a regulator of IE1 protein expression, demonstrating not only its anti-HCMV activity and synergistic effects with GCV but also providing a new therapeutic strategy for HCMV infection.

利托那韦诱导IE1蛋白酶体降解以抑制人巨细胞病毒复制。
人巨细胞病毒(HCMV)是影响免疫功能低下个体的主要病原体。目前的抗病毒药物针对病毒复制的中后期,但受到毒性和耐药性的限制。IE1蛋白是HCMV复制的关键早期调节剂;然而,由于缺乏传统的药物结合位点,它一直被认为是不可药物的。在这项研究中,通过结合基于分子对接的虚拟筛选和体外表面等离子体共振(SPR)验证,我们首次发现HIV蛋白酶抑制剂利托那韦(ritonavir)可能与IE1蛋白结合。进一步的实验表明,利托那韦在不影响其mRNA表达的情况下,以时间和剂量依赖的方式显著降低IE1蛋白水平。机制研究表明,利托那韦通过激活泛素-蛋白酶体途径促进IE1的选择性降解。功能分析证实,利托那韦有效抑制HCMV复制,显著降低病毒DNA载量和感染性病毒颗粒的产生。值得注意的是,利托那韦与一线药物更昔洛韦(GCV)联合使用时表现出协同抗病毒作用。综上所述,本研究成功地将已获批准的药物利托那韦作为IE1蛋白表达的调节剂,不仅证明了其抗HCMV活性和与GCV的协同作用,而且为HCMV感染的治疗提供了新的策略。
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来源期刊
PLoS Computational Biology
PLoS Computational Biology BIOCHEMICAL RESEARCH METHODS-MATHEMATICAL & COMPUTATIONAL BIOLOGY
CiteScore
7.10
自引率
4.70%
发文量
820
审稿时长
2.5 months
期刊介绍: PLOS Computational Biology features works of exceptional significance that further our understanding of living systems at all scales—from molecules and cells, to patient populations and ecosystems—through the application of computational methods. Readers include life and computational scientists, who can take the important findings presented here to the next level of discovery. Research articles must be declared as belonging to a relevant section. More information about the sections can be found in the submission guidelines. Research articles should model aspects of biological systems, demonstrate both methodological and scientific novelty, and provide profound new biological insights. Generally, reliability and significance of biological discovery through computation should be validated and enriched by experimental studies. Inclusion of experimental validation is not required for publication, but should be referenced where possible. Inclusion of experimental validation of a modest biological discovery through computation does not render a manuscript suitable for PLOS Computational Biology. Research articles specifically designated as Methods papers should describe outstanding methods of exceptional importance that have been shown, or have the promise to provide new biological insights. The method must already be widely adopted, or have the promise of wide adoption by a broad community of users. Enhancements to existing published methods will only be considered if those enhancements bring exceptional new capabilities.
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