Fan Zhang, Zhen Tang, Haoqi Du, Biyue Ma, Xia Liu, Ziyi Chang, Zeyu Zhao, Xinyu Zhang, Jinying Wang, Changchang Zhang, Boyu Wei, Jian Shu, Chen Zhang, Mingwei Chen, Hailong Xie, Zheng Li
{"title":"Salivary Glycoprofiling via a Machine Learning-Augmented Lectin Microarray for Noninvasive Risk Stratification of Lung Cancer","authors":"Fan Zhang, Zhen Tang, Haoqi Du, Biyue Ma, Xia Liu, Ziyi Chang, Zeyu Zhao, Xinyu Zhang, Jinying Wang, Changchang Zhang, Boyu Wei, Jian Shu, Chen Zhang, Mingwei Chen, Hailong Xie, Zheng Li","doi":"10.1021/acs.jproteome.6c00376","DOIUrl":null,"url":null,"abstract":"<p>Although aberrant glycosylation is closely associated\r\nwith lung\r\ncancer (LC), salivary glycopatterns and their discriminatory value\r\nacross healthy individuals, benign pulmonary disease, and LC remain\r\ninsufficiently characterized. We profiled saliva from 307 participants\r\nusing a lectin microarray, comprising a development cohort of 227\r\nparticipants and an independent test cohort of 80 participants. Five\r\ntask-specific LASSO-logistic regression models were constructed to\r\ndistinguish pulmonary disease, LC, and LC subtypes. A separate Nom-LC\r\nmodel combined consensus lectin features selected by LASSO and support\r\nvector machine recursive feature elimination with clinical variables.\r\nSalivary glycopatterns differed among healthy volunteers, benign pulmonary\r\ndisease, and LC groups, and the five task-specific models showed discriminatory\r\nperformance across pulmonary disease, LC, and exploratory subtype\r\nclassification tasks. The resulting Nom-LC model incorporated smoking\r\nhistory and four lectin signals (HHL, PNA, RCA120, and PWM), yielding\r\nAUCs of 0.908 and 0.907 in the training and internal validation sets.\r\nIn the independent test cohort, the AUC was 0.903 (95% CI, 0.831–0.976);\r\nat the prespecified cutoff, sensitivity, specificity, and accuracy\r\nwere 86.36%, 94.44%, and 90.00%, respectively. These findings support\r\nfurther evaluation of salivary glycopatterns as an auxiliary tool\r\nfor LC risk stratification, but prospective multicenter validation\r\nis required.</p>","PeriodicalId":48,"journal":{"name":"Journal of Proteome Research","volume":"25 10","pages":"5391–5403"},"PeriodicalIF":3.8000,"publicationDate":"2026-10-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Proteome Research","FirstCategoryId":"99","ListUrlMain":"https://pubs.acs.org/doi/10.1021/acs.jproteome.6c00376","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2026/9/15 0:00:00","PubModel":"Epub","JCR":"Q1","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
引用次数: 0
Abstract
Although aberrant glycosylation is closely associated
with lung
cancer (LC), salivary glycopatterns and their discriminatory value
across healthy individuals, benign pulmonary disease, and LC remain
insufficiently characterized. We profiled saliva from 307 participants
using a lectin microarray, comprising a development cohort of 227
participants and an independent test cohort of 80 participants. Five
task-specific LASSO-logistic regression models were constructed to
distinguish pulmonary disease, LC, and LC subtypes. A separate Nom-LC
model combined consensus lectin features selected by LASSO and support
vector machine recursive feature elimination with clinical variables.
Salivary glycopatterns differed among healthy volunteers, benign pulmonary
disease, and LC groups, and the five task-specific models showed discriminatory
performance across pulmonary disease, LC, and exploratory subtype
classification tasks. The resulting Nom-LC model incorporated smoking
history and four lectin signals (HHL, PNA, RCA120, and PWM), yielding
AUCs of 0.908 and 0.907 in the training and internal validation sets.
In the independent test cohort, the AUC was 0.903 (95% CI, 0.831–0.976);
at the prespecified cutoff, sensitivity, specificity, and accuracy
were 86.36%, 94.44%, and 90.00%, respectively. These findings support
further evaluation of salivary glycopatterns as an auxiliary tool
for LC risk stratification, but prospective multicenter validation
is required.
期刊介绍:
Journal of Proteome Research publishes content encompassing all aspects of global protein analysis and function, including the dynamic aspects of genomics, spatio-temporal proteomics, metabonomics and metabolomics, clinical and agricultural proteomics, as well as advances in methodology including bioinformatics. The theme and emphasis is on a multidisciplinary approach to the life sciences through the synergy between the different types of "omics".