Salivary Glycoprofiling via a Machine Learning-Augmented Lectin Microarray for Noninvasive Risk Stratification of Lung Cancer

IF 3.8 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Journal of Proteome Research Pub Date : 2026-10-02 Epub Date: 2026-09-15 DOI:10.1021/acs.jproteome.6c00376
Fan Zhang, Zhen Tang, Haoqi Du, Biyue Ma, Xia Liu, Ziyi Chang, Zeyu Zhao, Xinyu Zhang, Jinying Wang, Changchang Zhang, Boyu Wei, Jian Shu, Chen Zhang, Mingwei Chen, Hailong Xie, Zheng Li
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引用次数: 0

Abstract

Although aberrant glycosylation is closely associated with lung cancer (LC), salivary glycopatterns and their discriminatory value across healthy individuals, benign pulmonary disease, and LC remain insufficiently characterized. We profiled saliva from 307 participants using a lectin microarray, comprising a development cohort of 227 participants and an independent test cohort of 80 participants. Five task-specific LASSO-logistic regression models were constructed to distinguish pulmonary disease, LC, and LC subtypes. A separate Nom-LC model combined consensus lectin features selected by LASSO and support vector machine recursive feature elimination with clinical variables. Salivary glycopatterns differed among healthy volunteers, benign pulmonary disease, and LC groups, and the five task-specific models showed discriminatory performance across pulmonary disease, LC, and exploratory subtype classification tasks. The resulting Nom-LC model incorporated smoking history and four lectin signals (HHL, PNA, RCA120, and PWM), yielding AUCs of 0.908 and 0.907 in the training and internal validation sets. In the independent test cohort, the AUC was 0.903 (95% CI, 0.831–0.976); at the prespecified cutoff, sensitivity, specificity, and accuracy were 86.36%, 94.44%, and 90.00%, respectively. These findings support further evaluation of salivary glycopatterns as an auxiliary tool for LC risk stratification, but prospective multicenter validation is required.

通过机器学习增强凝集素微阵列进行无创肺癌风险分层的唾液糖谱分析
尽管异常糖基化与肺癌(LC)密切相关,但唾液糖型及其在健康个体、良性肺部疾病和LC中的区别价值仍未充分表征。我们使用凝集素微阵列分析了307名参与者的唾液,包括227名参与者的开发队列和80名参与者的独立测试队列。构建了五个任务特异性LASSO-logistic回归模型来区分肺部疾病、LC和LC亚型。一个单独的noml - lcmodel结合了LASSO选择的共识集素特征和支持向量机递归特征消除与临床变量。健康志愿者、良性肺部疾病组和LC组的唾液糖型不同,五个任务特异性模型在肺部疾病、LC和探索性亚型分类任务中表现出歧视性的表现。所得到的Nom-LC模型结合了吸烟史和四种集素信号(HHL、PNA、RCA120和PWM),在训练集和内部验证集的auc分别为0.908和0.907。在独立试验队列中,AUC为0.903 (95% CI, 0.831-0.976);在预先设定的截止点,灵敏度、特异性和准确性分别为86.36%、94.44%和90.00%。这些发现支持进一步评估唾液糖型作为LC风险分层的辅助工具,但需要前瞻性的多中心验证。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Journal of Proteome Research
Journal of Proteome Research 生物-生化研究方法
CiteScore
9.00
自引率
4.50%
发文量
251
审稿时长
3 months
期刊介绍: Journal of Proteome Research publishes content encompassing all aspects of global protein analysis and function, including the dynamic aspects of genomics, spatio-temporal proteomics, metabonomics and metabolomics, clinical and agricultural proteomics, as well as advances in methodology including bioinformatics. The theme and emphasis is on a multidisciplinary approach to the life sciences through the synergy between the different types of "omics".
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