The Effect of Single-Atom (Zn, Cd, or Hg) Replacement on the Strength and Directionality of the Spodium Bond

IF 3 2区 化学 Q3 CHEMISTRY, PHYSICAL
The Journal of Physical Chemistry A Pub Date : 2026-10-01 Epub Date: 2026-09-17 DOI:10.1021/acs.jpca.6c05244
Atash V. Gurbanov, Rosa M Gomila, Fatali E. Huseynov, Antonio Frontera, Kamran T. Mahmudov
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引用次数: 0

Abstract

The spodium bond (SpB) is an attractive noncovalent interaction between the Group 12 element (Zn, Cd, or Hg) and a nucleophile (Nu). In comparison to the monovariant H-bond at R–H···Nu synthon, the SpB parameters (strength and directionality) can also be regulated by replacement of a single spodium atom (Sp = Zn, Cd, or Hg) at R–Sp···Nu. In this work we examined the effect of a single spodium atom replacement strategy on the strength and directionality of inter- or intramolecular SpB in a series of coordination and supramolecular compounds obtained from the Cambridge Structural Database. Due to their d-orbitals, Group 12 elements commonly act as π-hole donors, and there is no clear trend between the strength of Sp···Nu interactions and either the atomic polarizability or the van der Waals radius of the Sp atom. Complementary density functional theory calculations employing QTAIM and natural bond orbital analysis reveal that the bonding character of spodium interactions transitions from coordination-like interactions in Cd complexes to genuine noncovalent bonds in Hg systems, with the σ-hole mechanism serving as the primary stabilization driver.

单原子(Zn, Cd或Hg)取代对Spodium键强度和方向性的影响
spodium键(SpB)是第12族元素(Zn、Cd或Hg)与亲核试剂(Nu)之间具有吸引力的非共价相互作用。与R-H··Nu合成子的单键氢键相比,SpB参数(强度和方向性)也可以通过替换R-Sp··Nu上的单个spodium原子(Sp = Zn、Cd或Hg)来调节。在这项工作中,我们研究了单钠原子取代策略对从剑桥结构数据库中获得的一系列配位和超分子化合物中分子间或分子内sp2的强度和方向性的影响。由于它们的d轨道,族12元素通常充当π空穴供体,Sp···不相互作用的强度与Sp原子的极化率或van der waals半径之间没有明显的趋势。采用QTAIM和自然键轨道分析的互补密度泛函理论计算表明,镉配合物中钠相互作用的成键特征从配位相互作用转变为汞体系中真正的非共价键,σ-空穴机制是主要的稳定驱动因素。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
The Journal of Physical Chemistry A
The Journal of Physical Chemistry A 化学-物理:原子、分子和化学物理
CiteScore
5.20
自引率
10.30%
发文量
922
审稿时长
1.3 months
期刊介绍: The Journal of Physical Chemistry A is devoted to reporting new and original experimental and theoretical basic research of interest to physical chemists, biophysical chemists, and chemical physicists.
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