Citizen Sailors Provide a Detailed Map of Open-Ocean Surface Biodiversity and Help Link eDNA Data to Satellite Observations

IF 3.7 1区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY
Pablo Saenz-Agudelo, Olivier Laroche, Ben Knight, Erin Bomati, Xavier Pochon
{"title":"Citizen Sailors Provide a Detailed Map of Open-Ocean Surface Biodiversity and Help Link eDNA Data to Satellite Observations","authors":"Pablo Saenz-Agudelo,&nbsp;Olivier Laroche,&nbsp;Ben Knight,&nbsp;Erin Bomati,&nbsp;Xavier Pochon","doi":"10.1111/mec.70571","DOIUrl":null,"url":null,"abstract":"<p>Characterizing open ocean biodiversity at basin scales remains challenging due to sparse sampling and limited opportunities to validate satellite-derived estimates of plankton community composition. Through the Citizens of the Sea initiative, we deployed standardized environmental DNA (eDNA) sampling kits on 27 sailing vessels during the 2024 Pacific Rally circumnavigating between New Zealand, Tonga, and Fiji, generating 728 surface ocean eDNA samples across 1.5 million km<sup>2</sup>. Using three complementary metabarcoding markers (bacterial 16S rRNA, eukaryotic 18S rRNA and metazoan Cytochrome Oxidase I genes), and following rigorous bioinformatic quality control, we obtained 31,177 unique Amplicon Sequence Variants (ASVs), providing the first high-resolution plankton biodiversity assessment of this understudied region. After accounting for human-derived variation, all metabarcoding markers revealed clear latitudinal patterns in alpha diversity and community composition. ASV richness increased significantly with sea-surface temperature and community turnover was strongly correlated with gradients in temperature and chlorophyll-a. Comparisons between eDNA-inferred phytoplankton functional groups and satellite-based estimates showed moderate agreement for prokaryote-dominated communities (<i>R</i><sup>2</sup> = 0.27) but a weak correlation for eukaryotic phytoplankton (<i>R</i><sup>2</sup> &lt; 0.15), reflecting functional-type-specific mismatches between molecular and remote sensing approaches. Our results reinforce that citizen science fleets can generate high-quality oceanographic eDNA datasets at scales unattainable by research expeditions, while demonstrating the strong potential of these initiatives to bridge molecular observations with satellite-derived assessments and improve our understanding of open ocean plankton biodiversity.</p>","PeriodicalId":210,"journal":{"name":"Molecular Ecology","volume":"35 19","pages":""},"PeriodicalIF":3.7000,"publicationDate":"2026-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13624691/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Molecular Ecology","FirstCategoryId":"99","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1111/mec.70571","RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIOCHEMISTRY & MOLECULAR BIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Characterizing open ocean biodiversity at basin scales remains challenging due to sparse sampling and limited opportunities to validate satellite-derived estimates of plankton community composition. Through the Citizens of the Sea initiative, we deployed standardized environmental DNA (eDNA) sampling kits on 27 sailing vessels during the 2024 Pacific Rally circumnavigating between New Zealand, Tonga, and Fiji, generating 728 surface ocean eDNA samples across 1.5 million km2. Using three complementary metabarcoding markers (bacterial 16S rRNA, eukaryotic 18S rRNA and metazoan Cytochrome Oxidase I genes), and following rigorous bioinformatic quality control, we obtained 31,177 unique Amplicon Sequence Variants (ASVs), providing the first high-resolution plankton biodiversity assessment of this understudied region. After accounting for human-derived variation, all metabarcoding markers revealed clear latitudinal patterns in alpha diversity and community composition. ASV richness increased significantly with sea-surface temperature and community turnover was strongly correlated with gradients in temperature and chlorophyll-a. Comparisons between eDNA-inferred phytoplankton functional groups and satellite-based estimates showed moderate agreement for prokaryote-dominated communities (R2 = 0.27) but a weak correlation for eukaryotic phytoplankton (R2 < 0.15), reflecting functional-type-specific mismatches between molecular and remote sensing approaches. Our results reinforce that citizen science fleets can generate high-quality oceanographic eDNA datasets at scales unattainable by research expeditions, while demonstrating the strong potential of these initiatives to bridge molecular observations with satellite-derived assessments and improve our understanding of open ocean plankton biodiversity.

公民水手提供开放海洋表面生物多样性的详细地图,并帮助将eDNA数据与卫星观测联系起来。
由于采样稀疏,并且验证浮游生物群落组成的卫星估计的机会有限,在盆地尺度上表征开放海洋生物多样性仍然具有挑战性。通过海洋公民倡议,我们在2024年太平洋拉力赛期间在新西兰、汤加和斐济之间的27艘帆船上部署了标准化的环境DNA (eDNA)采样工具包,在150万平方公里的范围内产生了728个表面海洋eDNA样本。利用三个互补的元条形码标记(细菌16S rRNA、真核生物18S rRNA和后生动物细胞色素氧化酶I基因),在严格的生物信息学质量控制下,我们获得了31,177个独特的扩增子序列变异(asv),首次提供了这一尚不充分研究区域的高分辨率浮游生物多样性评估。在考虑了人类来源的变异后,所有元条形码标记都显示了α多样性和群落组成的明确纬度格局。ASV丰富度随海面温度的升高而显著增加,群落更替与温度和叶绿素a的梯度密切相关。edna推断的浮游植物功能群与卫星估算的浮游植物功能群之间的比较显示,原核生物占优势的群落具有中等程度的一致性(R2 = 0.27),而真核生物占优势的群落具有较弱的相关性(R2 = 0.27)
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Molecular Ecology
Molecular Ecology 生物-进化生物学
CiteScore
8.40
自引率
10.20%
发文量
472
审稿时长
1 months
期刊介绍: Molecular Ecology publishes papers that utilize molecular genetic techniques to address consequential questions in ecology, evolution, behaviour and conservation. Studies may employ neutral markers for inference about ecological and evolutionary processes or examine ecologically important genes and their products directly. We discourage papers that are primarily descriptive and are relevant only to the taxon being studied. Papers reporting on molecular marker development, molecular diagnostics, barcoding, or DNA taxonomy, or technical methods should be re-directed to our sister journal, Molecular Ecology Resources. Likewise, papers with a strongly applied focus should be submitted to Evolutionary Applications. Research areas of interest to Molecular Ecology include: * population structure and phylogeography * reproductive strategies * relatedness and kin selection * sex allocation * population genetic theory * analytical methods development * conservation genetics * speciation genetics * microbial biodiversity * evolutionary dynamics of QTLs * ecological interactions * molecular adaptation and environmental genomics * impact of genetically modified organisms
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信
小红书