Knowledge Mapping of Human Genetic Variation in Multiomics Biomarker Translation: A Bibliometric Analysis

IF 1.8 2区 医学 Q2 GENETICS & HEREDITY
Bangshu Zhao, Wei Ran, Ning Liang
{"title":"Knowledge Mapping of Human Genetic Variation in Multiomics Biomarker Translation: A Bibliometric Analysis","authors":"Bangshu Zhao,&nbsp;Wei Ran,&nbsp;Ning Liang","doi":"10.1155/humu/5730260","DOIUrl":null,"url":null,"abstract":"<p>Human genetic variation and multiomics biomarker translation has emerged as a rapidly developing research field at the intersection of molecular medicine, bioinformatics, and clinical decision-making. This study used bibliometric methods to map its global structure, intellectual base, and thematic evolution. The eligibility framework was deliberately restricted to studies in which inherited or somatic human genetic variation was substantively linked to omics-integrated biomarker discovery, functional interpretation, clinical stratification, or therapeutic response; generic omics studies without a variation-linked translational endpoint were excluded. Publications indexed in Scopus, Web of Science, and PubMed from 2003 to 2025 were retrieved, screened, converted into Web of Science format, and analyzed using CiteSpace, VOSviewer, and the R package bibliometrix. A total of 673 publications were included. The annual output showed sustained acceleration, indicating a transition from exploratory molecular association studies to a more mature translational framework. Research activity was concentrated in a limited number of countries and institutions, led by the United States, with China contributing substantial output but lower citation impact relative to publication volume. The institutional network was dominated by large academic medical centers, national research systems, and oncology-oriented consortia, reflecting the infrastructural demands of biomarker translation. Journal analysis showed a dual structure in which specialized translational and omics journals accounted for much of the current output, whereas the intellectual foundations remained anchored in high-impact journals in genetics, oncology, and clinical medicine. Keyword and overlay analyses revealed a clear thematic shift from pharmacogenetics and single-marker discovery toward genomics-guided, multiomics-integrated, and clinically actionable biomarker models, with recent emphasis on liquid biopsy, heterogeneity, artificial intelligence, machine learning, and the tumor microenvironment. At the variant level, the major translational bottleneck is increasingly the functional connection between DNA-level variation and downstream RNA, protein, pathway, and clinical phenotypes rather than variant detection alone. The literature is therefore increasingly oriented toward externally validated and computationally interpretable biomarker systems, whereas routine clinical implementation remains constrained by functional validation, assay standardization, prospective evaluation, and regulatory requirements.</p>","PeriodicalId":13061,"journal":{"name":"Human Mutation","volume":"2026 1","pages":""},"PeriodicalIF":1.8000,"publicationDate":"2026-09-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13618366/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Human Mutation","FirstCategoryId":"3","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1155/humu/5730260","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0

Abstract

Human genetic variation and multiomics biomarker translation has emerged as a rapidly developing research field at the intersection of molecular medicine, bioinformatics, and clinical decision-making. This study used bibliometric methods to map its global structure, intellectual base, and thematic evolution. The eligibility framework was deliberately restricted to studies in which inherited or somatic human genetic variation was substantively linked to omics-integrated biomarker discovery, functional interpretation, clinical stratification, or therapeutic response; generic omics studies without a variation-linked translational endpoint were excluded. Publications indexed in Scopus, Web of Science, and PubMed from 2003 to 2025 were retrieved, screened, converted into Web of Science format, and analyzed using CiteSpace, VOSviewer, and the R package bibliometrix. A total of 673 publications were included. The annual output showed sustained acceleration, indicating a transition from exploratory molecular association studies to a more mature translational framework. Research activity was concentrated in a limited number of countries and institutions, led by the United States, with China contributing substantial output but lower citation impact relative to publication volume. The institutional network was dominated by large academic medical centers, national research systems, and oncology-oriented consortia, reflecting the infrastructural demands of biomarker translation. Journal analysis showed a dual structure in which specialized translational and omics journals accounted for much of the current output, whereas the intellectual foundations remained anchored in high-impact journals in genetics, oncology, and clinical medicine. Keyword and overlay analyses revealed a clear thematic shift from pharmacogenetics and single-marker discovery toward genomics-guided, multiomics-integrated, and clinically actionable biomarker models, with recent emphasis on liquid biopsy, heterogeneity, artificial intelligence, machine learning, and the tumor microenvironment. At the variant level, the major translational bottleneck is increasingly the functional connection between DNA-level variation and downstream RNA, protein, pathway, and clinical phenotypes rather than variant detection alone. The literature is therefore increasingly oriented toward externally validated and computationally interpretable biomarker systems, whereas routine clinical implementation remains constrained by functional validation, assay standardization, prospective evaluation, and regulatory requirements.

多组学生物标记翻译中人类遗传变异的知识图谱:文献计量学分析。
人类遗传变异和多组学生物标志物翻译是分子医学、生物信息学和临床决策交叉领域的一个快速发展的研究领域。本研究使用文献计量学方法来绘制其全球结构、知识基础和专题演变。资格框架被故意限制在遗传或体细胞人类遗传变异与组学集成生物标志物发现、功能解释、临床分层或治疗反应实质性相关的研究中;没有变异相关转译终点的通用组学研究被排除在外。检索2003 - 2025年在Scopus、Web of Science和PubMed中检索的出版物,进行筛选,转换为Web of Science格式,并使用CiteSpace、VOSviewer和R软件包bibliometrix进行分析。共包括673份出版物。年产出持续加速,表明从探索性分子关联研究向更成熟的翻译框架过渡。研究活动集中在以美国为首的少数国家和机构,中国贡献了大量产出,但相对于出版物量,引用影响较低。机构网络由大型学术医疗中心、国家研究系统和肿瘤学联盟主导,反映了生物标志物翻译的基础设施需求。期刊分析显示了一种双重结构,在这种结构中,专业的翻译和组学期刊占当前产出的大部分,而知识基础仍然固定在遗传学、肿瘤学和临床医学等高影响力期刊上。关键词和覆盖分析显示,从药物遗传学和单标记物发现到基因组学指导、多组学集成和临床可操作的生物标记物模型的明显主题转变,最近的重点是液体活检、异质性、人工智能、机器学习和肿瘤微环境。在变异水平上,主要的翻译瓶颈越来越多地是dna水平变异与下游RNA、蛋白质、途径和临床表型之间的功能联系,而不仅仅是变异检测。因此,文献越来越倾向于外部验证和计算可解释的生物标志物系统,而常规临床实施仍然受到功能验证、测定标准化、前瞻性评估和监管要求的限制。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Human Mutation
Human Mutation 医学-遗传学
CiteScore
8.40
自引率
5.10%
发文量
190
审稿时长
2 months
期刊介绍: Human Mutation is a peer-reviewed journal that offers publication of original Research Articles, Methods, Mutation Updates, Reviews, Database Articles, Rapid Communications, and Letters on broad aspects of mutation research in humans. Reports of novel DNA variations and their phenotypic consequences, reports of SNPs demonstrated as valuable for genomic analysis, descriptions of new molecular detection methods, and novel approaches to clinical diagnosis are welcomed. Novel reports of gene organization at the genomic level, reported in the context of mutation investigation, may be considered. The journal provides a unique forum for the exchange of ideas, methods, and applications of interest to molecular, human, and medical geneticists in academic, industrial, and clinical research settings worldwide.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信
小红书