eDNA, forensic ecologies and the barcoding of urban life

IF 15.3
Matthew Gandy
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Abstract

The field of urban ecology is being transformed by advances in DNA barcoding, genomics and bioinformatics. The advent of environmental DNA (eDNA), in particular, moves beyond the identification of individual species towards the rapid assessment of entire ecosystems. Urban ecology is being transformed through new sampling and sequencing techniques that are reframing the city as an object of study. The increasing emphasis on eDNA presents a notable elaboration of systems-based conceptions of urban ecology but there has been little engagement with the wider implications of these developments for the conceptualization of urban space. Here I outline the prospects for an alternative conceptual synthesis that lies closer to the concerns of the social and historical sciences. I suggest that a closer engagement with the related field of forensic ecologies can provide a methodological bridge between new advances in DNA sequencing and post-positivist approaches to the study of cities. Environmental DNA and associated techniques are transforming urban ecology and its conception of cities. Matthew Gandy argues for leveraging such ‘forensic ecologies’ for a post-positivist conceptual synthesis with the social and historical sciences.
dna,法医生态学和城市生活的条形码
DNA条形码、基因组学和生物信息学的进步正在改变城市生态学领域。特别是环境DNA (eDNA)的出现,超越了对单个物种的鉴定,走向了对整个生态系统的快速评估。城市生态正在通过新的采样和排序技术进行改造,这些技术正在将城市重新构建为研究对象。对eDNA的日益重视,对基于系统的城市生态学概念提出了显著的阐述,但很少涉及这些发展对城市空间概念化的更广泛影响。在这里,我概述了另一种概念综合的前景,这种综合更接近于社会科学和历史科学的关注。我建议,与法医生态学相关领域的更密切接触可以在DNA测序的新进展和城市研究的后实证主义方法之间提供方法论桥梁。环境DNA和相关技术正在改变城市生态及其城市概念。马修·甘迪(Matthew Gandy)主张利用这种“法医生态学”与社会科学和历史科学进行后实证主义概念综合。
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