Design, synthesis, drug-likeness, and molecular dynamics evaluations of monobrominated amathamide G analogs as potential ligands for D2-like dopamine receptors.

In silico pharmacology Pub Date : 2026-09-06 eCollection Date: 2026-01-01 DOI:10.1007/s40203-026-00741-1
Angélica Navarrete-Gutiérrez, Octavio Frías-Aviña, Julio Montes-Ávila, Raúl Argüello-García, Edar O Pech-Santiago, Gerardo Aguirre-Hernández
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Abstract

Dopamine receptors (DRs) are key modulators of physiological and behavioral responses in the central nervous system (CNS), playing a major role in psychotic disorders. Among these, the D2-like members D2R, D3R and D4R are particularly attractive therapeutic targets for the development of novel compounds derived from both synthetic and natural sources. The marine bryozoan Amathia produces alkaloids known as amathamides (A-H), among which the tribrominated amathamide G (AM-G) stands out as a promising scaffold. Its benzene-aliphatic linker-pentacyclic structure is reminiscent of standard dopamine antagonists such as eticlopride (ETI). In this study, a debrominated (AM-0) and monobrominated derivatives (M4B, M5B and M6B) were successfully synthesized and purified. As an initial preclinical assessment, the drug likeness profiles of these compounds were predicted and analyzed based on physicochemical properties, medicinal chemistry, and pharmacokinetic parameters. The analysis revealed that debromination of AM-G improves both lipid and aqueous solubility, enhances overall drug desirability across four major medicinal chemistry rule sets, and predicts better CNS penetration, bioavailability, half-life, and clearance, while maintaining a relatively low risk of carcinogenicity. Molecular docking and molecular dynamics (MD) simulations suggested a differential affinity amongst amathamide G derivatives towards D2-like receptors. Specifically, AM-G behaved as a high-affinity putative ligand for D3R/D4R, whereas M5B and M6B showed selectivity for D2R. These findings support continued in vitro and in vivo evaluation of these compounds, particularly in models involving expression, structure-based variations, and pathologies associated with D2R-like receptors.

Supplementary information: The online version contains supplementary material available at https://doi.org/10.1007/s40203-026-00741-1.

单溴化亚马他胺G类似物作为d2样多巴胺受体潜在配体的设计、合成、药物相似性和分子动力学评价。
多巴胺受体(dr)是中枢神经系统(CNS)生理和行为反应的关键调节剂,在精神疾病中起重要作用。其中,d2样成员D2R、D3R和D4R是开发来自合成和天然来源的新化合物的特别有吸引力的治疗靶点。海洋苔藓虫Amathia产生的生物碱被称为金刚烷酰胺(a - h),其中三溴化金刚烷酰胺G (AM-G)是一种很有前途的支架。它的苯-脂肪连接-五环结构让人想起标准的多巴胺拮抗剂,如eticlopride (ETI)。本研究成功合成并纯化了脱溴化(AM-0)和单溴化衍生物(M4B、M5B和M6B)。作为初步的临床前评估,根据这些化合物的理化性质、药物化学和药代动力学参数预测和分析了它们的药物相似性。分析显示,脱溴AM-G改善了脂质和水溶性,提高了四种主要药物化学规则集的总体药物可取性,并预测了更好的中枢神经系统渗透、生物利用度、半衰期和清除率,同时保持了相对较低的致癌性风险。分子对接和分子动力学(MD)模拟表明,阿马他胺G衍生物对d2样受体具有不同的亲和力。具体来说,AM-G对D3R/D4R具有高亲和力,而M5B和M6B对D2R具有选择性。这些发现支持了对这些化合物的体外和体内持续评估,特别是在涉及表达、结构变异和与d2r样受体相关的病理的模型中。补充信息:在线版本包含补充资料,可在https://doi.org/10.1007/s40203-026-00741-1上获得。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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