Dechloromonas parva sp. nov., a Member of the Family Azonexaceae.

IF 3.4 4区 生物学 Q3 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Min-Gyung Baek, Ji-Hyeon Son, Hana Yi, Sangcheol Park
{"title":"<i>Dechloromonas parva</i> sp. nov., a Member of the Family <i>Azonexaceae</i>.","authors":"Min-Gyung Baek, Ji-Hyeon Son, Hana Yi, Sangcheol Park","doi":"10.4014/jmb.2602.02044","DOIUrl":null,"url":null,"abstract":"<p><p>A <i>Dechloromonas</i>-like bacterial strain, designated HYN0024<sup>T</sup>, was isolated from lake water, and its taxonomic status was characterized in this study. Although the bacterium was isolated from an aerobic water sample, its cells were facultative anaerobes utilizing Fe(III) and oxygen as terminal electron acceptors. Phylogenetic analysis based on both genome and 16S rRNA gene sequences indicated that strain HYN0024<sup>T</sup> belongs to the family <i>Azonexaceae</i> and forms a monophyletic clade with the type strains of <i>Ferribacterium limneticum</i>, <i>Quatrionicoccus australiensis</i>, and '<i>Dechloromonas aromatica</i>'. However, the type strains of the genera <i>Ferribacterium</i> and <i>Quatrionicoccus</i> are currently unavailable from any public culture collections. Among the available type strains with validly published names, <i>Dechloromonas hortensis</i> shared the highest 16S rRNA gene sequence similarity (98.35%) with strain HYN0024<sup>T</sup>, but their average nucleotide identity (80.13%) was below the threshold for species delineation. The biochemical and physiological features also supported the distinctiveness of the isolate from previously known species. The 16S rRNA gene sequence similarity, genomic relatedness, phylogenetic tree topology, and phenotypic characteristics supported the taxonomic independence of the isolate as a novel species in the genus <i>Dechloromonas</i>. Based on the phylogenetic and polyphasic taxonomic data presented in this study, we propose a novel species, <i>Dechloromonas parva</i> sp. nov., for strain HYN0024<sup>T</sup> (= KACC 19179<sup>T</sup> = NBRC 112737<sup>T</sup>).</p>","PeriodicalId":16481,"journal":{"name":"Journal of microbiology and biotechnology","volume":"36 ","pages":"e2602044"},"PeriodicalIF":3.4000,"publicationDate":"2026-08-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13550009/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of microbiology and biotechnology","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.4014/jmb.2602.02044","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

A Dechloromonas-like bacterial strain, designated HYN0024T, was isolated from lake water, and its taxonomic status was characterized in this study. Although the bacterium was isolated from an aerobic water sample, its cells were facultative anaerobes utilizing Fe(III) and oxygen as terminal electron acceptors. Phylogenetic analysis based on both genome and 16S rRNA gene sequences indicated that strain HYN0024T belongs to the family Azonexaceae and forms a monophyletic clade with the type strains of Ferribacterium limneticum, Quatrionicoccus australiensis, and 'Dechloromonas aromatica'. However, the type strains of the genera Ferribacterium and Quatrionicoccus are currently unavailable from any public culture collections. Among the available type strains with validly published names, Dechloromonas hortensis shared the highest 16S rRNA gene sequence similarity (98.35%) with strain HYN0024T, but their average nucleotide identity (80.13%) was below the threshold for species delineation. The biochemical and physiological features also supported the distinctiveness of the isolate from previously known species. The 16S rRNA gene sequence similarity, genomic relatedness, phylogenetic tree topology, and phenotypic characteristics supported the taxonomic independence of the isolate as a novel species in the genus Dechloromonas. Based on the phylogenetic and polyphasic taxonomic data presented in this study, we propose a novel species, Dechloromonas parva sp. nov., for strain HYN0024T (= KACC 19179T = NBRC 112737T).

小脱氯单胞菌,偶氮藻科的一员。
从湖泊水体中分离到一株脱氯单胞菌样细菌,命名为HYN0024T,并对其分类地位进行了鉴定。虽然细菌是从好氧水样中分离出来的,但它的细胞是兼性厌氧菌,利用铁(III)和氧作为终端电子受体。基于基因组和16S rRNA基因序列的系统发育分析表明,菌株HYN0024T属于Azonexaceae科,与limneticum铁杆菌、australoniccoccus australiensis和decchloromonas aromatica型菌株形成一个单系分支。然而,铁杆菌属和四孢子球菌属的类型菌株目前无法从任何公共培养收藏中获得。在已发表有效名称的有效型菌株中,霍氏脱氯单胞菌与HYN0024T的16S rRNA基因序列相似性最高(98.35%),但其平均核苷酸同源性(80.13%)低于种划分阈值。生物化学和生理特征也支持分离物与先前已知物种的独特性。16S rRNA基因序列相似性、基因组亲缘性、系统发育树拓扑结构和表型特征支持该分离物作为脱氯单胞菌属新种的分类独立性。根据本研究的系统发育和多相分类数据,我们提出了菌株HYN0024T (= KACC 19179T = NBRC 112737T)的新种——小绿单胞菌(Dechloromonas parva sp. nov.)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Journal of microbiology and biotechnology
Journal of microbiology and biotechnology BIOTECHNOLOGY & APPLIED MICROBIOLOGY-MICROBIOLOGY
CiteScore
5.50
自引率
3.60%
发文量
151
审稿时长
2 months
期刊介绍: The Journal of Microbiology and Biotechnology (JMB) is a monthly international journal devoted to the advancement and dissemination of scientific knowledge pertaining to microbiology, biotechnology, and related academic disciplines. It covers various scientific and technological aspects of Molecular and Cellular Microbiology, Environmental Microbiology and Biotechnology, Food Biotechnology, and Biotechnology and Bioengineering (subcategories are listed below). Launched in March 1991, the JMB is published by the Korean Society for Microbiology and Biotechnology (KMB) and distributed worldwide.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信
小红书