4-Ethyl phenyl sulfate binding to human serum albumin.

IF 5.6 3区 生物学 Q1 BIOCHEMISTRY & MOLECULAR BIOLOGY
Protein Science Pub Date : 2026-09-01 DOI:10.1002/pro.70755
Vida Dehghan Niestanak, Jacopo Zattoni, Ryan T McKay, Marcello Tonelli, Maral Aminpour, Larry D Unsworth
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引用次数: 0

Abstract

Protein-bound uremic toxins (PBUTs) such as 4-ethylphenyl sulfate (4-EPS) challenge kidney failure management due to strong binding to human serum albumin (HSA), thus limiting dialysis clearance. This study examined 4-EPS-HSA interactions using saturation transfer difference nuclear magnetic resonance spectroscopy (STD-NMR), isothermal titration calorimetry (ITC), in silico analysis via molecular docking, molecular dynamics (MD), and molecular mechanics Generalized Born surface area (MM/GBSA) simulations. STD-NMR qualitatively showed competitive binding with the site-specific ligands, warfarin and ibuprofen, indicating interaction with both Sudlow Sites I and II; competitive ITC results also showed competition between these molecules. ITC analysis using a two-component model indicated two distinct binding interactions with association constants Ka1 = 6.62 × 105 M-1 (entropically unfavorable) and Ka2 = 2.71 × 104 M-1 (enthalpically favorable), respectively. Docking models were used to analyze representative binding poses at Sudlow Sites I and II, while MD revealed hydrophobic stabilization at Site I and polar interactions at Site II. MM/GBSA per-residue decomposition identified key stabilizing residues. Circular dichroism measurements showed that the observed binding effects are not accompanied by gross protein unfolding. Comparisons with other PBUTs, including indoxyl sulfate and p-cresyl sulfate, indicated the role of electrostatic and hydrophobic forces involved in binding. These findings advance understanding of PBUT-HSA interactions and inform strategies for improved toxin removal in kidney failure treatments.

4-苯基硫酸乙酯与人血清白蛋白的结合。
蛋白质结合的尿毒症毒素(PBUTs),如4-乙基苯基硫酸酯(4-EPS),由于与人血清白蛋白(HSA)的强结合,从而限制了透析清除,挑战了肾功能衰竭的管理。本研究使用饱和转移差核磁共振波谱(STD-NMR)、等温滴量热法(ITC)、分子对接、分子动力学(MD)和分子力学广义Born表面积(MM/GBSA)模拟的硅分析来研究4-EPS-HSA的相互作用。STD-NMR定性显示与位点特异性配体华法林和布洛芬竞争性结合,表明与Sudlow位点I和II相互作用;竞争性ITC结果也显示了这些分子之间的竞争。采用双组分模型的ITC分析表明,结合常数Ka1 = 6.62 × 105 M-1(熵不利)和Ka2 = 2.71 × 104 M-1(焓有利)分别为两种不同的结合相互作用。对接模型用于分析Sudlow位点I和II的典型结合姿态,而MD揭示了Site I的疏水稳定性和Site II的极性相互作用。MM/GBSA每残基分解鉴定出关键的稳定残基。圆二色性测量表明,观察到的结合效应不伴有总蛋白展开。与其他PBUTs(包括硫酸吲哚酚和对甲酚硫酸盐)的比较表明,静电和疏水力参与了结合。这些发现促进了对PBUT-HSA相互作用的理解,并为肾衰竭治疗中改进毒素去除的策略提供了信息。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Protein Science
Protein Science 生物-生化与分子生物学
CiteScore
12.40
自引率
1.20%
发文量
246
审稿时长
1 months
期刊介绍: Protein Science, the flagship journal of The Protein Society, is a publication that focuses on advancing fundamental knowledge in the field of protein molecules. The journal welcomes original reports and review articles that contribute to our understanding of protein function, structure, folding, design, and evolution. Additionally, Protein Science encourages papers that explore the applications of protein science in various areas such as therapeutics, protein-based biomaterials, bionanotechnology, synthetic biology, and bioelectronics. The journal accepts manuscript submissions in any suitable format for review, with the requirement of converting the manuscript to journal-style format only upon acceptance for publication. Protein Science is indexed and abstracted in numerous databases, including the Agricultural & Environmental Science Database (ProQuest), Biological Science Database (ProQuest), CAS: Chemical Abstracts Service (ACS), Embase (Elsevier), Health & Medical Collection (ProQuest), Health Research Premium Collection (ProQuest), Materials Science & Engineering Database (ProQuest), MEDLINE/PubMed (NLM), Natural Science Collection (ProQuest), and SciTech Premium Collection (ProQuest).
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