Comparative Screening of Alzheimer's Disease, Lewy Body Dementia, and Frontotemporal Dementia Using miRNA and Machine Learning.

IF 6.4
International journal of neural systems Pub Date : 2027-01-01 Epub Date: 2026-07-27 DOI:10.1142/S012906572750002X
Benjamin Luo, Valentina L Kouznetsova, Igor F Tsigelny
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Abstract

Current dementia diagnostic methods can be costly, invasive, or limited in their ability to distinguish between disorders with overlapping clinical symptoms. Dysregulated microRNAs (miRNAs) have emerged as promising noninvasive biomarkers for neurodegenerative disease, but individual miRNA changes alone may not capture the complex molecular patterns needed for accurate disease classification. Machine learning provides a way to integrate multiple layers of miRNA-derived information and identify disease-specific biomarker signatures. In this study, we developed machine learning models to classify dysregulated miRNAs associated with Alzheimer's disease dementia (AD), Lewy body dementia (LBD), and frontotemporal dementia (FTD). Each miRNA was represented using sequence-derived descriptors, predicted gene targets, and KEGG pathway features. The highest-performing models trained on AD, LBD, and FTD achieved 10-fold cross-validation accuracies of 90.6%, 92.9%, and 100%, respectively. When evaluated on independent datasets, the AD, LBD, and FTD models achieved accuracies of 88.9%, 77.8%, and 90.9%, respectively. Cross-disease testing showed reduced performance when models were applied across dementia types, suggesting partially disease-specific miRNA patterns while also indicating overlap among the molecular signatures of AD, LBD, and FTD. These results suggest that machine learning-based integration of miRNA sequence, target-gene, and pathway information can improve the identification of dementia-associated biomarker signatures and may support the future development of noninvasive diagnostic tools for dementia.

使用miRNA和机器学习对阿尔茨海默病、路易体痴呆和额颞叶痴呆进行比较筛查。
目前的痴呆症诊断方法可能是昂贵的,侵入性的,或者在区分具有重叠临床症状的疾病方面能力有限。失调的microrna (miRNA)已成为神经退行性疾病的有前途的非侵入性生物标志物,但单独的miRNA变化可能无法捕获准确疾病分类所需的复杂分子模式。机器学习提供了一种整合多层mirna衍生信息和识别疾病特异性生物标志物特征的方法。在这项研究中,我们开发了机器学习模型来分类与阿尔茨海默病痴呆(AD)、路易体痴呆(LBD)和额颞叶痴呆(FTD)相关的失调mirna。每个miRNA都使用序列衍生的描述子、预测的基因靶点和KEGG通路特征来表示。在AD、LBD和FTD上训练的表现最好的模型分别达到了90.6%、92.9%和100%的10倍交叉验证准确率。在独立数据集上进行评估时,AD、LBD和FTD模型的准确率分别为88.9%、77.8%和90.9%。跨疾病测试显示,当模型应用于不同类型的痴呆症时,性能下降,这表明部分疾病特异性miRNA模式,同时也表明AD、LBD和FTD的分子特征之间存在重叠。这些结果表明,基于机器学习的miRNA序列、靶基因和通路信息的整合可以提高对痴呆症相关生物标志物特征的识别,并可能支持痴呆症无创诊断工具的未来发展。
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