{"title":"Neural Network–Based Depth Retrieval of Fluorescent Targets From Wide-Field Fluorescence Intensity Images in Scattering Tissues","authors":"Meital Harel, Neelima Chacko, Menachem Motiei, Amos Azaria, Rinat Ankri","doi":"10.1002/jbio.70325","DOIUrl":null,"url":null,"abstract":"<p>Fluorescence imaging (FI) is widely used in in vivo and cellular studies. However, accurate depth determination of fluorescent targets in vivo remains challenging due to strong photon scattering and absorption in biological tissues. In this study, we developed and validated a machine learning (ML)-based framework, supported by Monte Carlo (MC) simulations, for accurate depth estimation of near-infrared (NIR) fluorescent targets in turbid media. An optimized MC model was constructed to simulate NIR fluorescence photon propagation, generating datasets of fluorescence images corresponding to target depths between 0.1 and 1 cm. Experimental validation was conducted over a depth range of 0.1–0.7 cm using tissue-mimicking phantoms designed to replicate the optical properties of human skin, as well as on an in vivo model incorporating fluorescent gold nanostructures imaged with computed tomography (CT) and wide-field FI. The results were quantitatively validated using two performance metrics: rounded accuracy and root mean squared error (RMSE).</p>","PeriodicalId":184,"journal":{"name":"Journal of Biophotonics","volume":"19 7","pages":""},"PeriodicalIF":2.0000,"publicationDate":"2026-07-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC13401773/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Biophotonics","FirstCategoryId":"101","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/jbio.70325","RegionNum":3,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
引用次数: 0
Abstract
Fluorescence imaging (FI) is widely used in in vivo and cellular studies. However, accurate depth determination of fluorescent targets in vivo remains challenging due to strong photon scattering and absorption in biological tissues. In this study, we developed and validated a machine learning (ML)-based framework, supported by Monte Carlo (MC) simulations, for accurate depth estimation of near-infrared (NIR) fluorescent targets in turbid media. An optimized MC model was constructed to simulate NIR fluorescence photon propagation, generating datasets of fluorescence images corresponding to target depths between 0.1 and 1 cm. Experimental validation was conducted over a depth range of 0.1–0.7 cm using tissue-mimicking phantoms designed to replicate the optical properties of human skin, as well as on an in vivo model incorporating fluorescent gold nanostructures imaged with computed tomography (CT) and wide-field FI. The results were quantitatively validated using two performance metrics: rounded accuracy and root mean squared error (RMSE).
期刊介绍:
The first international journal dedicated to publishing reviews and original articles from this exciting field, the Journal of Biophotonics covers the broad range of research on interactions between light and biological material. The journal offers a platform where the physicist communicates with the biologist and where the clinical practitioner learns about the latest tools for the diagnosis of diseases. As such, the journal is highly interdisciplinary, publishing cutting edge research in the fields of life sciences, medicine, physics, chemistry, and engineering. The coverage extends from fundamental research to specific developments, while also including the latest applications.